lineage | Count |
---|---|
lineage4 | 3 |
61 | |
lineage4.3.3 | 3 |
lineage4.9 | 3 |
lineage2.2.1 | 5 |
lineage2 | 1 |
lineage4.9;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.3 | 1 |
lineage2.2 | 2 |
lineage4.1.2.1 | 4 |
lineage3 | 2 |
lineage4.1.3 | 2 |
lineage6.3.1 | 1 |
spoligotype | Count |
---|---|
None | 90 |
ID | Drug resistance | Lineage | Country iso2 | SRR1167384 | Other | lineage4 | None | SRR1172857 | MDR-TB | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196494 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1184381 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | ERR176779 | HR-TB | None | SRR19303884 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19304036 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816999 | Other | None | ERR4817060 | RR-TB | None | SRR3675574 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4818615 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | ERR323043 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR502532 | HR-TB | None | SRR7496517 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR3283027 | HR-TB | None | ERR323045 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797069 | Other | None | ERR4811142 | MDR-TB | None | ERR4407463 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR736867 | HR-TB | None | ERR702406 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736874 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786604 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR990545 | Other | lineage3 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None |
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