EBG00000313339 - n.839C>T
Drug resistance types
12 Sensitive
20 RR-TB
6 HR-TB
8 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.8 | 20 |
| lineage6.3.1 | 1 |
| lineage3 | 7 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1 | 8 |
| lineage1.1.3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.9 | 15 |
| lineage4.6.1.1 | 2 |
| lineage2.2.2 | 4 |
| lineage4.3.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.7 | 1 |
| 2 | |
| La1.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 6 |
| lineage4.2.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| La1.4 | 1 |
| lineage2.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 90 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4817554 | Other | lineage1.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | ERR2513259 | Other | lineage3 | None | ERR2513710 | HR-TB | lineage4.1.2.1 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4821054 | Other | lineage3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821286 | Other | lineage4.8 | None | SRR6045158 | Other | lineage4.9 | None | ERR4822125 | Other | lineage4.6.1.1 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046737 | Other | lineage4.9 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397359 | Other | lineage4.3.2 | ca | SRR6485008 | HR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6964650 | Sensitive | lineage3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7517748 | HR-TB | lineage4.4.1.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR7496471 | Sensitive | None | DRR184629 | Other | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | DRR184932 | Other | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | ERR019855 | Other | lineage3 | None | ERR017781 | Other | lineage3 | None | ERR10796559 | Other | lineage4.9 | None | ERR10748076 | MDR-TB | lineage4.3.4.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3797063 | HR-TB | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4407489 | Sensitive | lineage4.2.1.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR5865953 | MDR-TB | lineage2.2.1 | None | ERR6866241 | Other | lineage4.3.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173421 | RR-TB | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | SRR16278292 | Other | La1.4 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21658760 | Sensitive | lineage2.2 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | SRR16156751 | RR-TB | lineage4.9 | None | SRR18572455 | Sensitive | lineage4.9 | None | ERR2228965 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR2229366 | Other | lineage4.8 | None | ERR4816470 | Other | lineage3 | None | ERR2229811 | Other | lineage4.8 | dk | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2229791 | RR-TB | lineage4.9 | None | ERR2228890 | Other | lineage4 | None | ERR2229801 | Other | lineage4 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2229436 | Other | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229505 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228900 | RR-TB | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR2228910 | Other | lineage4.8 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SAMEA3501063 | RR-TB | lineage4.8 | None |
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