EBG00000313339 - n.839C>T
Drug resistance types
5 Sensitive
26 RR-TB
3 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 42 |
| lineage3 | 3 |
| lineage4.9 | 5 |
| lineage4.6.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.7 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.2 | 3 |
| lineage2.2.1 | 3 |
| lineage4.1.2.1 | 2 |
| La3;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| La1.4 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR978748 | Other | lineage4.8 | None | SRR6152980 | HR-TB | lineage4.8 | ca | ERR4816470 | HR-TB | lineage3 | None | ERR911930 | Other | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | SRR1173421 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR978752 | Other | lineage4.8 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR10869285 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR978727 | Other | lineage4.8 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR2228899 | Other | lineage4.8 | None | ERR2228900 | Other | lineage4.8 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | ERR019855 | Other | lineage3 | None | ERR3283046 | Sensitive | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR978726 | RR-TB | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR16278292 | Other | La1.4 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR10748076 | MDR-TB | lineage4.3.4.2.1 | None | ERR2229366 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | DRR185024 | Other | lineage2.2.2 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None |
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