EBG00000313339 - n.839C>T


Drug resistance types
12 Sensitive 20 RR-TB 6 HR-TB 8 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 41 Other
lineage Counts
lineage Count
lineage4.1.1.3.1;lineage3.1.2 1
lineage1.1.1 1
lineage4.8 20
lineage6.3.1 1
lineage3 7
lineage4.1.2.1 3
lineage2.2.1 8
lineage1.1.3.1 1
lineage1.1.3.2 1
lineage4.9 15
lineage4.6.1.1 2
lineage2.2.2 4
lineage4.3.2 2
lineage4.4.1.2 1
lineage4.4.1.1 2
lineage4.7 1
2
La1.8.1 1
lineage4.3.4.2.1 1
lineage4 6
lineage4.2.1.1 1
lineage1.1.1.1 1
La1.4 1
lineage2.2 1
lineage4.6.2.2 1
lineage3.1.2.1 1
lineage4.5 1
lineage4.1.1.3 2
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 90
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
ERR4817554 Other lineage1.1.1 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4818440 Other lineage6.3.1 None
ERR2513259 Other lineage3 None
ERR2513710 HR-TB lineage4.1.2.1 gb
SAMEA3501070 RR-TB lineage4.8 None
ERR4820503 Other lineage2.2.1 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR2514801 Other lineage1.1.3.2 gb
ERR4821054 Other lineage3 None
SAMEA3501052 RR-TB lineage4.8 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4821286 Other lineage4.8 None
SRR6045158 Other lineage4.9 None
ERR4822125 Other lineage4.6.1.1 None
ERR4828879 MDR-TB lineage3 None
SRR6045191 Sensitive lineage4.9 None
SRR6046737 Other lineage4.9 None
SRR6152899 MDR-TB lineage2.2.2 ca
SRR6397359 Other lineage4.3.2 ca
SRR6485008 HR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR6397733 Other lineage4.4.1.2 None
SRR6397815 Other lineage4.4.1.1 None
SRR6964650 Sensitive lineage3 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
SRR7517748 HR-TB lineage4.4.1.1 None
SRR6152980 HR-TB lineage4.8 ca
SRR7496471 Sensitive None
DRR184629 Other lineage2.2.1 None
SRR8600288 Other La1.8.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
DRR184932 Other lineage2.2.1 None
DRR185024 Other lineage2.2.2 None
ERR019855 Other lineage3 None
ERR017781 Other lineage3 None
ERR10796559 Other lineage4.9 None
ERR10748076 MDR-TB lineage4.3.4.2.1 None
ERR037234 Sensitive lineage4.9 None
ERR3797065 MDR-TB lineage4 None
ERR3283046 MDR-TB lineage4.9 None
ERR3797063 HR-TB None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4407489 Sensitive lineage4.2.1.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4808964 RR-TB lineage2.2.1 None
ERR736816 Other lineage4.9 None
ERR5865953 MDR-TB lineage2.2.1 None
ERR6866241 Other lineage4.3.2 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR1173833 Other lineage4.9 None
SRR10315551 Sensitive lineage2.2.1 None
SRR1173766 Sensitive lineage4.9 None
SRR10869285 Pre-XDR-TB lineage2.2.2 None
SRR1173421 RR-TB lineage4.9 None
ERR2229147 Other lineage4.8 None
SRR16278292 Other La1.4 None
SRR18572456 Sensitive lineage4.9 None
SRR20632814 Sensitive lineage4 None
SRR21658760 Sensitive lineage2.2 None
SAMEA3501065 RR-TB lineage4.8 None
ERR2229810 Other lineage4.8 None
SRR16156751 RR-TB lineage4.9 None
SRR18572455 Sensitive lineage4.9 None
ERR2228965 Other lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR2229366 Other lineage4.8 None
ERR4816470 Other lineage3 None
ERR2229811 Other lineage4.8 dk
ERR4816717 RR-TB lineage3.1.2.1 None
ERR2229791 RR-TB lineage4.9 None
ERR2228890 Other lineage4 None
ERR2229801 Other lineage4 None
ERR2228810 RR-TB lineage4 None
ERR2229436 Other lineage4.8 None
ERR2229804 Other lineage4 None
ERR2228838 RR-TB lineage4.8 None
ERR2229505 Other lineage4.8 None
ERR2228899 RR-TB lineage4.8 None
ERR4815816 Other lineage4.5 gb
ERR2228900 RR-TB lineage4.8 None
ERR2512423 Other lineage4.1.1.3 None
ERR2513382 RR-TB lineage4.1.1.3 None
ERR2228910 Other lineage4.8 None
ERR245675 Sensitive lineage1.1.2 None
SAMEA3501063 RR-TB lineage4.8 None