lineage | Count |
---|---|
lineage4.9 | 19 |
6 | |
lineage4.7 | 1 |
lineage4.6.1.1 | 1 |
lineage2.2.1 | 4 |
lineage4 | 4 |
lineage4.3.3 | 1 |
lineage4.6.1.2 | 5 |
lineage4.1.2.1 | 1 |
lineage3 | 2 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
La1.6 | 1 |
lineage4.8 | 2 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819863 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR7496471 | Sensitive | None | ERR502943 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR036207 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4815310 | Other | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Sensitive | None | ERR4815550 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675541 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816729 | Sensitive | lineage4.9 | None |
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