Rv0667 - c.2197_2199delAACinsCG
Drug resistance types
52 Sensitive
24 RR-TB
28 HR-TB
24 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 83 |
| lineage4.6.5 | 2 |
| lineage4.2.1 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4 | 3 |
| lineage2.2.1 | 12 |
| lineage2.2.2 | 2 |
| lineage5.1.1 | 1 |
| lineage4.8.1 | 3 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8 | 3 |
| La1.7.X-unk4 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1.1.3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage3 | 9 |
| lineage4.1.2.1 | 4 |
| lineage2.2;lineage4 | 1 |
| La1.3 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.6.1.2 | 3 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.3 | 4 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.4 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.7 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 166 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283055 | HR-TB | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR7496471 | Sensitive | lineage4 | None | ERR751345 | Other | lineage5.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR10315558 | RR-TB | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR736831 | Other | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR1173281 | Other | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180440 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR9786076 | Other | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR6046046 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR16156804 | Sensitive | lineage4.9 | None |
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