lineage | Count |
---|---|
lineage4.9 | 31 |
lineage2.2.1;lineage4.9 | 2 |
lineage4.3.2.1 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage2.2.2 | 6 |
lineage4.3.3 | 2 |
lineage2.2.1 | 6 |
lineage3 | 2 |
lineage4.8.1 | 1 |
lineage4.8 | 1 |
lineage4 | 2 |
lineage4.1.2.1 | 2 |
lineage4.9.1 | 1 |
lineage4.7 | 1 |
lineage2;lineage4.9 | 1 |
lineage4.1.1.3 | 1 |
lineage2.2.1;lineage2.2.2 | 1 |
lineage1.2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 64 |
ID | Drug resistance | Lineage | Country iso2 | SRR1172885 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR29093141 | MDR-TB | lineage2.2.2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR13260155 | RR-TB | lineage4.3.3 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1180420 | Sensitive | lineage4.9 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | SRR1183054 | Sensitive | lineage4.9 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181349 | Sensitive | lineage4 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4596910 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1013634 | MDR-TB | lineage2.2.2 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1180977 | Sensitive | lineage4.9 | None |
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