Rv3596c - c.882T>C
Drug resistance types
40 Sensitive
6 RR-TB
32 HR-TB
10 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| 36 | |
| lineage4.9 | 21 |
| lineage4 | 46 |
| lineage5.2 | 2 |
| lineage2.2.1 | 12 |
| lineage2.2.1.1 | 3 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| La1.8.1 | 3 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| La1 | 1 |
| lineage2.2 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage6.3.1 | 1 |
| lineage3 | 2 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6046152 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR2693257 | Other | None | SRR6045399 | Other | None | SRR6044838 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR1063896 | Sensitive | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3797015 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR4596910 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769472 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797264 | Sensitive | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR6866022 | Other | None | ERR5866536 | MDR-TB | lineage2.2.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358991 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR11462861 | Other | La1.8.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR16278274 | Other | La1.4 | None | SRR1173777 | Other | lineage4 | None | SRR14782405 | HR-TB | None | SRR1180996 | HR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR1791747 | Other | La1.8.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675234 | Other | None | ERR212121 | HR-TB | None | ERR176643 | HR-TB | None | ERR552328 | Sensitive | lineage6.3.1 | None | ERR4815550 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818086 | Sensitive | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR234659 | HR-TB | None | SRR5341387 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341467 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693232 | Other | lineage4.9 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693231 | Other | None |
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