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SRA data
Rv0005
- c.1611C>A
Drug resistance types
6 Sensitive
2 RR-TB
3 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
5
La1.7;lineage4.9
4
La1.7;M.canetti;lineage4.9
3
lineage2.2.1.1
3
lineage1.2.2.1;lineage4.4.1.1
2
lineage5.2
2
lineage4.9
1
lineage4
1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
1
lineage4.9;lineage6.1.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
25
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465711
Other
lineage1.2.2.1;lineage4.4.1.1
None
ERR11465714
Other
lineage1.2.2.1;lineage4.4.1.1
None
ERR3445504
Other
lineage4.9;lineage6.1.3
None
ERR4811212
Sensitive
lineage2.2.1
cn
ERR4872094
MDR-TB
lineage5.2
None
ERR736835
HR-TB
La1.7;M.canetti;lineage4.9
None
ERR736863
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
ERR9119500
MDR-TB
lineage5.2
None
SRR1180147
Other
lineage2.2.1.1
None
SRR1183106
RR-TB
lineage2.2.1.1
None
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