lineage | Count |
---|---|
lineage1.1.1.1 | 1 |
lineage4 | 3 |
lineage4.9 | 18 |
lineage3 | 3 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
lineage4.6.1.1 | 3 |
lineage2.2.1 | 4 |
lineage4.1.2.1 | 3 |
lineage4.3.2.1 | 1 |
lineage4.8 | 2 |
lineage4.3.3 | 2 |
lineage4.2.1 | 1 |
lineage4.7 | 1 |
1 | |
lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 45 |
ID | Drug resistance | Lineage | Country iso2 | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR4033455 | Sensitive | lineage4.3.2.1 | None | ERR4814976 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4818904 | Other | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR4820100 | Other | lineage4.3.3 | None | SRR6046737 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044841 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796571 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None |
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