EBG00000313339 - n.607T>G
Drug resistance types
10 Sensitive
30 RR-TB
9 HR-TB
7 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 11 |
| lineage2.2.1 | 18 |
| lineage4.8 | 23 |
| lineage1.1.2 | 3 |
| lineage3.1.2.2 | 2 |
| La1.8.1 | 4 |
| lineage4.3.1.1 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.9 | 10 |
| 4 | |
| lineage4.4.1.2 | 1 |
| lineage4 | 5 |
| lineage5.1.1 | 1 |
| lineage4.7 | 2 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 11 |
| lineage4.3.3 | 10 |
| lineage4.3 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.2.2.2 | 2 |
| lineage6 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.3.3 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.2 | 1 |
| lineage4.8.2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4828879 | MDR-TB | lineage3 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR8600232 | Other | La1.8.1 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR7496471 | Sensitive | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR323037 | HR-TB | lineage4 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR8600107 | Other | La1.8.1 | None | ERR4796577 | MDR-TB | None | SRR8600288 | Other | La1.8.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4586795 | Other | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR9117676 | Other | lineage4.2.2.2 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR19303985 | Other | lineage4.8 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR19304094 | Other | lineage6 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4814312 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR2229810 | Other | lineage4.8 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4814930 | Other | lineage4.4.1.1 | None | ERR4815792 | Other | lineage4.1.2.1 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814952 | Sensitive | lineage3 | None | ERR2229540 | Other | lineage4.8 | None | ERR4817046 | Other | lineage3 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4817060 | RR-TB | None | SRR3675565 | Other | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR2229147 | Other | lineage4.8 | None | ERR4816464 | Other | lineage3 | None | ERR4816470 | Other | lineage3 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817175 | Other | lineage4.8 | None | ERR4817189 | Other | lineage4.7 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR2229436 | Other | lineage4.8 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR4817751 | Other | lineage1.1.3.3 | None | ERR2228910 | Other | lineage4.8 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR2515055 | Other | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR4818565 | Other | lineage4.8 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR2512941 | Other | lineage1.1.2 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4819287 | Other | lineage1.1.3.3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR2515032 | Other | lineage3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821879 | Other | lineage4.6.1.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045778 | Other | lineage3.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None |
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