EBG00000313325 - n.835C>T
Drug resistance types
12 Sensitive
13 RR-TB
22 HR-TB
26 MDR-TB
12 Pre-XDR-TB
3 XDR-TB
235 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 33 |
| lineage6.1.1 | 1 |
| lineage2.2.1 | 42 |
| lineage4.2.2.2 | 6 |
| lineage1.2.2.2 | 4 |
| lineage4.6.2.2 | 5 |
| lineage4.1.2.1 | 28 |
| lineage4.1.1.3 | 12 |
| 10 | |
| lineage4.4.1.1 | 9 |
| lineage3 | 31 |
| lineage4.9 | 20 |
| lineage4.3.3 | 11 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.1.2 | 5 |
| lineage4.1.1.3.1 | 3 |
| lineage4.1.1.2 | 4 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1 | 7 |
| lineage4.7 | 5 |
| lineage4.6 | 2 |
| lineage4.8.2 | 3 |
| lineage1.1.2 | 4 |
| lineage3.1.3 | 2 |
| lineage1.2.1.2.1 | 3 |
| lineage4.5 | 3 |
| lineage4;lineage3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.6.1 | 1 |
| lineage4.8.1 | 3 |
| lineage1.2.2.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage1.2.2 | 1 |
| lineage4.3.4.2 | 5 |
| La3 | 1 |
| lineage4.3.1.1 | 3 |
| lineage4.4 | 2 |
| lineage3.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage3.1.2 | 3 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage4.9;lineage3 | 1 |
| lineage3.1.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| La1.8.1 | 4 |
| lineage2.2.1.1 | 3 |
| lineage4.3.2 | 2 |
| lineage4 | 3 |
| lineage6.3.2 | 1 |
| La1.2 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 323 |
Geographic prevalence
Country level data for this variant is available for 77 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815261 | Other | lineage4.8 | gb | SRR21658552 | Other | lineage6.1.1 | None | SRR21798279 | MDR-TB | lineage2.2.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815771 | Other | lineage1.2.2.2 | gb | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4814512 | Other | lineage2.2.1 | None | ERR4814438 | HR-TB | lineage4.1.2.1 | gb | ERR4814551 | Other | lineage4.1.2.1 | gb | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR4814690 | Sensitive | lineage2.2.1 | None | ERR4814643 | Other | lineage4.1.2.1 | None | SRR3675234 | Other | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | ERR1665405 | Pre-XDR-TB | lineage2.2.1 | None | ERR1750889 | Other | lineage4.4.1.1 | None | ERR4818401 | HR-TB | lineage2.2.1 | gb | ERR1750907 | RR-TB | None | ERR1750922 | Sensitive | lineage4.1.1.3 | za | ERR1750920 | Sensitive | lineage4.4.1.1 | za | ERR4815521 | Other | lineage4.8 | gb | ERR4814767 | MDR-TB | lineage2.2.1 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR1750929 | Sensitive | lineage4.1.1.3 | za | SRR3675287 | Other | lineage3 | None | SRR3675282 | Other | None | ERR4814901 | Other | lineage2.2.1 | gb | SRR3675284 | HR-TB | lineage4.9 | None | ERR4816147 | RR-TB | lineage2.2.1 | gb | SRR3675288 | Other | lineage3 | None | SRR3675452 | Other | lineage3 | None | ERR4815921 | Other | lineage4.3.3 | gb | ERR4816031 | Other | lineage4.3.3 | gb | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR3675456 | HR-TB | None | ERR4815917 | Other | lineage2.2.1 | gb | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR4816181 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR4816219 | Other | lineage4.1.1.2 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | SRR3675555 | HR-TB | None | ERR4816582 | Other | lineage4.1.1.3 | gb | SRR3675567 | Other | lineage4.8 | gb | ERR4816470 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4818663 | Other | lineage3 | None | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4816725 | Other | lineage4.8 | gb | ERR4816779 | Other | lineage3 | gb | ERR4816800 | Other | lineage4.8 | gb | ERR4816827 | HR-TB | lineage4.7 | gb | ERR4816869 | Other | lineage4.3.3 | None | ERR4816882 | Other | lineage4.8 | None | ERR4818694 | RR-TB | lineage2.2.1 | gb | ERR2513005 | Other | lineage4.6 | gb | ERR2513384 | Other | lineage4.8.2 | gb | ERR4817834 | Other | lineage1.1.2 | gb | ERR2513389 | Other | lineage3.1.3 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | ERR2513059 | Other | lineage4.1.1 | gb | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2513054 | Other | lineage4.2.2.2 | None | ERR2510753 | Other | lineage4.8 | it | ERR2513440 | Other | lineage4.1.1.3 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR4818003 | Other | lineage1.2.1.2.1 | gb | ERR2510804 | Other | lineage2.2.1 | None | ERR4818797 | Other | lineage4.5 | None | ERR2512442 | Other | lineage4.8.2 | None | ERR4819078 | Other | lineage4.3.3 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR2512693 | Other | lineage1.1.2 | gb | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818280 | Other | lineage4.1.2.1 | gb | ERR2513273 | Other | lineage4.1.2.1 | None | ERR2513259 | Other | lineage3 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | ERR2512832 | Other | lineage4.3.4.1 | None | ERR4818634 | Other | lineage4.6.1 | None | SRR5007180 | Other | None | ERR4817551 | Other | lineage4.9 | None | ERR4817618 | Other | lineage4.8.1 | None | ERR4820242 | Other | lineage1.2.2.1 | None | ERR4820711 | HR-TB | lineage4.1.2 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR2513738 | Other | lineage1.1.3.1 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR2513837 | Other | lineage4.1.2.1 | gb | ERR4819262 | Other | lineage4.1.2.1 | None | ERR2513850 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2513929 | Other | lineage4.1.1.2 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR2513949 | Other | lineage3 | gb | ERR2513975 | Other | lineage3 | gb | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819424 | Other | lineage4.8 | gb | ERR2514263 | Other | lineage4.1.2.1 | gb | ERR4819503 | Other | lineage3 | None | ERR4820748 | Other | lineage3 | None | ERR2514533 | Other | lineage4.9 | None | ERR4819661 | Other | lineage3 | gb | ERR4820471 | Other | lineage3 | gb | ERR2514345 | Other | lineage4.8 | gb | ERR4820771 | Other | lineage4.8 | None | ERR2515818 | Other | lineage4.3.2.1 | za | ERR4820884 | Other | lineage4.1.1 | gb | ERR2514652 | Other | lineage4.7 | gb | ERR2514673 | Other | lineage4.1.2.1 | gb | ERR4820801 | Other | lineage1.2.2 | None | ERR2514753 | Other | lineage3 | None | ERR4820047 | HR-TB | lineage4.8 | gb | ERR2514668 | Other | lineage4.8.1 | gb | ERR2514739 | Other | lineage4.8 | gb | ERR2516042 | Other | lineage4.1.1.3 | za | ERR2514857 | Other | lineage2.2.1 | None | ERR4820575 | Other | lineage3 | gb | ERR4820622 | Other | lineage4.3.4.2 | None | ERR4821120 | Other | lineage4.1.2.1 | gb | ERR4820192 | Other | La3 | None | ERR4820926 | Other | lineage4.8 | gb | ERR4821054 | Other | lineage3 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR6045465 | Other | lineage4.4 | gb | ERR4821109 | Other | lineage4.1.2.1 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR6046096 | Other | lineage4.1.2.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045485 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | ERR4821280 | Other | lineage4.1.1 | gb | ERR4821995 | Other | lineage2.2.1 | gb | ERR4822150 | Other | lineage4.8 | gb | ERR4821371 | Other | lineage4.8 | gb | SRR6045614 | Other | lineage4.8 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045726 | Other | lineage3 | None | SRR5818591 | Other | lineage4.2.2.2 | dj | SRR6045749 | Other | lineage4.1.1 | gb | SRR6045797 | Other | lineage4.1.1.2 | gb | SRR6045805 | Other | lineage4.3.1.1 | None | SRR5818670 | Other | lineage4.1.2.1 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045894 | Other | lineage4.8 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044993 | Other | lineage3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044774 | Other | lineage3 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044946 | Other | lineage4.1.2.1 | gb | SRR6045992 | Other | lineage3 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6045986 | Other | lineage3 | None | SRR6045110 | Other | lineage3 | None | SRR6045135 | Other | lineage3 | None | SRR6045164 | Other | lineage4.1.2.1 | None | SRR6045158 | Other | lineage4.9 | None | SRR6046177 | Other | lineage3.1.2 | None | SRR6045178 | Other | lineage3 | None | SRR6045199 | Other | lineage2.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045295 | Other | lineage4.7 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6046197 | Other | lineage4.3.3 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6046275 | Other | lineage3.1.1 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046239 | Other | lineage4.9;lineage3 | None | SRR1735629 | Other | lineage1.2.2.2 | gb | SRR6046291 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR4829337 | Other | lineage4.8 | None | ERR2843515 | MDR-TB | lineage2.2.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046634 | Other | lineage3 | gb | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | SRR6046779 | Other | lineage4.1.2.1 | gb | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | ERR4863405 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131028 | Other | lineage4.8 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131198 | Other | lineage4.3.3 | None | SRR7131201 | Other | lineage4.8 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6824324 | Other | lineage4.5 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR7131031 | Other | lineage4.2.2.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR8600099 | Other | La1.8.1 | None | SRR8600217 | Other | La1.8.1 | None | SRR8600222 | Other | La1.8.1 | None | SRR9971101 | XDR-TB | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR9971147 | RR-TB | lineage2.2.1 | None | SRR9971209 | RR-TB | lineage2.2.1 | None | ERR3261389 | Other | lineage4.9 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR4796577 | MDR-TB | None | ERR3261351 | Other | lineage4.9 | None | ERR3804166 | Other | lineage4.3.2 | None | ERR387051 | HR-TB | None | ERR4596910 | Sensitive | lineage4 | None | ERR3261359 | Other | lineage4.9 | None | ERR3468585 | Other | La1.8.1 | None | ERR5336160 | Other | lineage6.3.2 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR6197036 | Other | lineage4 | None | ERR6197038 | HR-TB | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197030 | Other | lineage4.9 | None | ERR6197042 | RR-TB | lineage4.9 | None | ERR9117675 | Other | lineage4.8 | None | ERR6338273 | Other | La1.2 | None | ERR6338358 | Other | La1.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117690 | Other | lineage4.8 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9117711 | Other | lineage4.3.4.2.1 | None | ERR9117704 | Other | lineage4.6 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117725 | Other | lineage4.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117728 | Other | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9786452 | Other | lineage4.3.2 | None | SRR10315462 | RR-TB | lineage4.3.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR10851620 | Other | lineage4.1.2 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315610 | RR-TB | lineage4.2.2.2 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR10315715 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | SRR11342679 | Other | lineage4.6.3 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR11349182 | MDR-TB | lineage2.2.1 | None | SRR11349179 | MDR-TB | lineage2.2.1 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12199455 | Other | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR14802219 | Other | lineage4.8 | None | SRR15316084 | Other | lineage2.2.1 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR17832798 | Other | lineage3 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR15316102 | Other | lineage2.2.1.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18213721 | Other | lineage4.8 | None | SRR18213675 | Other | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18912998 | Sensitive | lineage3 | None | SRR18213780 | Other | lineage4.1.1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR20969923 | Other | lineage2.2.1 | None | SRR2101627 | Other | lineage4.1.2.1 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR2101076 | Other | lineage4.3.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21239878 | HR-TB | lineage4.4.1.1 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None |
|---|
