EBG00000313325 - n.835C>T
Drug resistance types
5 Sensitive
5 RR-TB
11 HR-TB
24 MDR-TB
8 Pre-XDR-TB
2 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1 | 8 |
| lineage4.7 | 3 |
| lineage4.9 | 13 |
| lineage2.2.1 | 22 |
| lineage1.2.2.2 | 5 |
| 1 | |
| lineage2.2.1.1 | 3 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.3.3 | 6 |
| lineage4.8 | 13 |
| lineage3 | 12 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.3.2 | 2 |
| lineage4.1.2 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.2 | 3 |
| lineage4 | 1 |
| lineage4.4.1.1 | 4 |
| lineage3.1.1 | 4 |
| lineage6.1.3 | 1 |
| lineage4.8.1 | 3 |
| lineage4.6.2.2 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.5 | 3 |
| lineage1.1.3.2 | 1 |
| La1.2 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.1.1.3 | 4 |
| lineage3.1.3 | 1 |
| lineage6.3.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage7 | 2 |
| lineage4.4.2 | 2 |
| lineage3.1.2.2 | 1 |
| La1.7;lineage2.2.1 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.2 | 2 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage2.2.2 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 152 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045618 | Other | lineage3.1.2 | None | SRR5818591 | Other | lineage4.2.2.2 | dj | SRR19304035 | Other | lineage4.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | ERR867569 | Other | lineage4.9 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR7068927 | Other | lineage1.2.2.2 | None | ERR4796577 | HR-TB | None | SRR12062482 | MDR-TB | lineage2.2.1.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR867566 | Other | lineage4.9 | None | SRR1735599 | Other | lineage1.2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR7069018 | Other | lineage4.8 | None | SRR6045110 | Other | lineage3 | None | SRR11342669 | Other | lineage4.8 | None | SRR14802219 | Other | lineage4.8 | None | ERR9117732 | Other | lineage1.2.2.2 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | ERR3804166 | Other | lineage4.3.2 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR3675452 | Other | lineage3 | None | SRR11342680 | Other | lineage4.8 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | SRR15316084 | Other | lineage2.2.1 | None | SRR7069687 | Other | lineage4.1.1.3.1 | None | SRR11349151 | MDR-TB | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR7069164 | Other | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR7496471 | Sensitive | lineage4 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR6044841 | Other | lineage4.9 | None | ERR9117725 | Other | lineage4.1.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867555 | Other | lineage3 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR7070087 | Other | lineage4.8.1 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | ERR2515818 | Other | lineage4.3.2.1 | za | ERR4596910 | Sensitive | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR9786452 | Other | lineage4.3.2 | None | SRR6824324 | Other | lineage4.5 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR6045726 | Other | lineage3 | None | ERR6338273 | Other | La1.2 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR5336160 | Other | lineage6.3.2 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR7069319 | Other | lineage4.5 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6855828 | Other | lineage4.3.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR6046291 | Other | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR18213721 | Other | lineage4.8 | None | SRR7068873 | Other | lineage4.8 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR20969923 | Other | La1.7;lineage2.2.1 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR2513259 | Other | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR6045599 | Other | lineage4.8 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR2660505 | Other | lineage1.2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR21240202 | HR-TB | lineage4.4.1.1 | None | SRR6045199 | Other | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR2516042 | Other | lineage4.1.1.3 | za | SRR7131287 | Other | lineage2.2.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR11349182 | MDR-TB | lineage2.2.1 | None | SRR6045986 | Other | lineage3 | None | SRR6045261 | Other | lineage1.1.2 | gb | ERR3261389 | Other | lineage4.9 | None | ERR3559290 | HR-TB | lineage4.2.2 | None | ERR3559289 | HR-TB | lineage4.2.2 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR7070553 | Other | lineage3 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7070596 | Other | lineage4.8 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7069628 | Other | lineage4.1.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | ERR3261359 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR3261351 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR2101627 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR7069074 | Other | lineage3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR7069216 | Other | lineage4.1.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR7131201 | Other | lineage4.8 | None | ERR867520 | Other | lineage4.7 | None | SRR7069760 | Other | lineage3 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None |
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