Rv0668 - c.1066_1068delAGGinsCA
Drug resistance types
46 Sensitive
7 RR-TB
30 HR-TB
13 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 88 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.2.1 | 10 |
| lineage3 | 2 |
| lineage4 | 6 |
| lineage4.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.2 | 1 |
| lineage6.1.3 | 1 |
| La1.8.1 | 3 |
| lineage4.1.2.1 | 2 |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;lineage4.9 | 4 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| lineage2.2 | 2 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 153 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175487 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR4831794 | MDR-TB | lineage2.2.1.1 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4817998 | Other | lineage3 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR3275450 | Other | lineage4 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR752229 | Other | lineage4.5 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5535933 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR349299 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR20970016 | Other | lineage2.2 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None |
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