Rv3596c - c.1725C>T


Drug resistance types
34 Sensitive 4 RR-TB 8 HR-TB 10 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 31 Other
lineage Counts
lineage Count
lineage2.2.1 5
M.canetti;lineage4.2 1
lineage2.2.1.1 4
lineage4.1.2.1 3
lineage4.9 37
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.6.4;lineage4.9 1
lineage4.4.1.1.1 1
La3;lineage4 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.9 9
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.8 2
lineage4.3.2.1 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
La1.7;lineage3.1;lineage4 1
lineage4.4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4 1
lineage4.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
spoligotype Counts
spoligotype Count
None 88
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183144 Other lineage2.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR363456 Sensitive lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR3283028 Other La3;lineage4 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR1063846 HR-TB lineage4.9 None
SRR1181328 Other lineage2.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4769493 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR14782405 HR-TB lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR4799025 Other lineage4.8 None
SRR14782054 Other lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR6046385 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1180410 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1238559 Other lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR1181349 Sensitive lineage4 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None