lineage | Count |
---|---|
lineage4.9 | 10 |
lineage4 | 4 |
lineage2.2.1 | 4 |
4 | |
lineage4.4.2 | 1 |
lineage1.2.2 | 1 |
lineage3.1.1 | 2 |
lineage4.8 | 2 |
lineage4.1.2.1 | 2 |
lineage1.1.3 | 1 |
lineage4.5 | 1 |
lineage3.1 | 1 |
lineage4.1.2 | 1 |
lineage4.3.3 | 1 |
lineage4.2.1.1 | 1 |
lineage4;lineage3 | 1 |
lineage1 | 1 |
lineage3 | 18 |
lineage4.3.4.1 | 1 |
lineage4.6.2.2 | 1 |
spoligotype | Count |
---|---|
None | 58 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175052 | HR-TB | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR6197044 | RR-TB | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4816093 | Other | lineage1.1.3 | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816756 | RR-TB | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR2513553 | Other | lineage4;lineage3 | gb | ERR4818126 | RR-TB | lineage1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818393 | RR-TB | lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2510422 | Pre-XDR-TB | lineage3 | pk | ERR2510297 | MDR-TB | lineage3 | pk | ERR4817584 | MDR-TB | lineage3 | None | ERR2510445 | Pre-XDR-TB | lineage3 | pk | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR2514908 | Sensitive | lineage3 | None | ERR4820130 | Other | lineage3 | None | ERR4820833 | HR-TB | None | ERR4821214 | RR-TB | None | SRR6046173 | Other | lineage3 | None | SRR6045168 | Sensitive | lineage3 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6046558 | Other | lineage3 | gb | SRR6046634 | Other | lineage3 | gb | SRR6046865 | Sensitive | lineage3 | gb | ERR502470 | RR-TB | lineage4.9 | None | SRR6398107 | Sensitive | lineage3 | ca | SRR6152765 | Sensitive | lineage3 | ca | SRR6397742 | Sensitive | lineage3 | ca |
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