Rv3854c - c.1386delA
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
0 HR-TB
107 MDR-TB
394 Pre-XDR-TB
15 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 506 |
| lineage2.2.1;lineage4.3.3 | 6 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2 | 2 |
| lineage2.2;lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 516 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6458385 | MDR-TB | lineage2.2.1 | None | SRR6458403 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665654 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169070 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181073 | MDR-TB | lineage2.2.1 | None | ERR553250 | MDR-TB | lineage2.2.1 | None | SRR1162505 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181019 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181241 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181278 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184034 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232503 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166917 | MDR-TB | lineage2.2.1 | None | SRR1180989 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159122 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163299 | MDR-TB | lineage2.2.1 | None | ERR2513436 | MDR-TB | lineage2.2.1 | None | SRR1163023 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163349 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181082 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458451 | MDR-TB | lineage2.2.1 | None | SRR1172201 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162966 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458460 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665852 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232416 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665701 | Pre-XDR-TB | lineage2.2.1 | None | SRR1158950 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458447 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232439 | Pre-XDR-TB | lineage2.2.1 | None | SRR924717 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172064 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172219 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232754 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181247 | MDR-TB | lineage2.2.1 | None | SRR13232480 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419590 | Pre-XDR-TB | lineage2.2.1 | by | SRR13232708 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232537 | Pre-XDR-TB | lineage2.2.1 | None | ERR11082627 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665599 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665802 | MDR-TB | lineage2.2.1 | None | SRR1159053 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498690 | MDR-TB | lineage2.2.1 | None | ERR8665837 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911228 | MDR-TB | lineage2.2.1 | md | ERR8665856 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665845 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665881 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665944 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665964 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665601 | MDR-TB | lineage2.2.1 | None | ERR8665990 | MDR-TB | lineage2.2.1 | None | ERR8665800 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665820 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665828 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665831 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665835 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665847 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665842 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665857 | MDR-TB | lineage2.2.1 | None | ERR8665861 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665883 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665885 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665872 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665890 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665897 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665903 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665909 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665955 | XDR-TB | lineage2.2.1 | None | ERR8665971 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665583 | MDR-TB | lineage2.2.1 | None | ERR8665679 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665776 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665617 | XDR-TB | lineage2.2.1 | None | ERR8665899 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665804 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162491 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162952 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163310 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163326 | MDR-TB | lineage2.2.1 | None | SRR1163404 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169086 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172405 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184123 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232505 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232541 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232746 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070640 | MDR-TB | lineage2.2.1 | None | SRR924713 | MDR-TB | lineage2.2.1 | None | SRR958498 | Pre-XDR-TB | lineage2.2.1 | None | ERR551281 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665647 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169088 | MDR-TB | lineage2.2.1 | None | SRR1172269 | MDR-TB | lineage2.2.1 | None | SRR1181041 | MDR-TB | lineage2.2.1 | None | ERR8665767 | Pre-XDR-TB | lineage2.2.1 | None | SRR1158907 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163387 | MDR-TB | lineage2.2.1 | None | SRR1169025 | MDR-TB | lineage2.2.1 | None | SRR1181150 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232517 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232740 | XDR-TB | lineage2.2.1 | None | SRR1181045 | MDR-TB | lineage2.2.1 | None | SRR1181094 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516390 | MDR-TB | lineage2.2.1 | be | ERR2513994 | MDR-TB | lineage2.2.1 | gb | SRR1159294 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162535 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163121 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163313 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665715 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172238 | Pre-XDR-TB | lineage2.2.1 | None | SRR958488 | MDR-TB | lineage2.2.1 | None | SAMN02419609 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419569 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419534 | MDR-TB | lineage2.2.1 | by | SAMN02419567 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419585 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419593 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419659 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419656 | MDR-TB | lineage2.2.1 | by | SAMN02419614 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419583 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419602 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419588 | MDR-TB | lineage2.2.1 | by | SAMN02419676 | MDR-TB | lineage2.2.1 | by | SAMN02419558 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419667 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419664 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419628 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419631 | MDR-TB | lineage2.2.1 | by | SAMN02419658 | MDR-TB | lineage2.2.1 | by | SAMN02419533 | Pre-XDR-TB | lineage2.2.1 | by | SRR7070163 | MDR-TB | lineage2.2.1 | None | SRR6458463 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419556 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419570 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419571 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419547 | MDR-TB | lineage2.2.1 | by | SAMN02419612 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419655 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419615 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419638 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419562 | MDR-TB | lineage2.2.1 | by | SAMN02419596 | MDR-TB | lineage2.2.1 | by | ERR8665508 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232682 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181025 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181007 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181072 | Pre-XDR-TB | lineage2.2.1 | None | ERR2677446 | Pre-XDR-TB | lineage2.2.1 | de | SRR24710284 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159389 | MDR-TB | lineage2.2.1 | None | ERR8665782 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181305 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665515 | MDR-TB | lineage2.2.1 | None | ERR8665572 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665700 | Pre-XDR-TB | lineage2.2.1 | None | ERR4132455 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665796 | Pre-XDR-TB | lineage2.2.1 | None | SRR1158871 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159362 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163348 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169121 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665812 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232512 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665555 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232502 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172059 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232499 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710061 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665642 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163002 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163103 | MDR-TB | lineage2.2.1 | None | SRR1163369 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163423 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665554 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665641 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159384 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665662 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665798 | Pre-XDR-TB | lineage2.2.1 | None | SRR924714 | Pre-XDR-TB | lineage2.2.1 | None | SRR29538978 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665702 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285186 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665694 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR958501 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159044 | MDR-TB | lineage2.2.1 | None | ERR8665869 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181205 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665792 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284580 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159954 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02086226 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162541 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665598 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232690 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232581 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665643 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162542 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232762 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665684 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232519 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232545 | MDR-TB | lineage2.2.1 | None | SRR1158898 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159959 | MDR-TB | lineage2.2.1 | None | ERR8665748 | MDR-TB | lineage2.2.1 | None | ERR8665775 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232553 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172411 | MDR-TB | lineage2.2.1 | None | SRR1172368 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665518 | MDR-TB | lineage2.2.1 | None | SRR1181202 | MDR-TB | lineage2.2.1 | None | SRR6458449 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162980 | MDR-TB | lineage2.2.1 | None | SRR1180984 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159283 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162529 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163080 | Pre-XDR-TB | lineage2.2.1 | None | ERR4132458 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163114 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181080 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181152 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665584 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232583 | MDR-TB | lineage2.2.1 | None | ERR8665741 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232742 | MDR-TB | lineage2.2.1 | None | ERR8665791 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172264 | MDR-TB | lineage2.2.1 | None | SRR1172351 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163429 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181208 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169129 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458428 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458454 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180951 | MDR-TB | lineage2.2.1 | None | SRR1162947 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458384 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232759 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR7070509 | MDR-TB | lineage2.2.1 | None | SAMN02058521 | MDR-TB | lineage2.2.1 | None | ERR8665866 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458422 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232511 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159293 | Pre-XDR-TB | lineage2.2.1 | None | ERR4132459 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665648 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665970 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665565 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232763 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159034 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159351 | MDR-TB | lineage2.2.1 | None | SRR1162498 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163050 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169050 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172101 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172180 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180923 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181134 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163145 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831102 | XDR-TB | lineage2.2.1 | None | ERR8665891 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665930 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665954 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665567 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665557 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665577 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665984 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665579 | MDR-TB | lineage2.2.1 | None | ERR8665616 | XDR-TB | lineage2.2.1 | None | ERR8665614 | MDR-TB | lineage2.2.1 | None | ERR8665917 | MDR-TB | lineage2.2.1 | None | ERR8665908 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR8665923 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665980 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665978 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665983 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665996 | MDR-TB | lineage2.2.1 | None | SRR1169120 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665874 | XDR-TB | lineage2.2.1 | None | ERR4831096 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831099 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159760 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163139 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163354 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232571 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2510674 | MDR-TB | lineage2.2.1;lineage4.3.3 | it | ERR552141 | MDR-TB | lineage2.2.1 | ru | SRR1181159 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184125 | MDR-TB | lineage2.2.1 | None | SAMN02419541 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419548 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419674 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419595 | Pre-XDR-TB | lineage2.2.1 | by | SRR6458393 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419662 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419565 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419650 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419587 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419649 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419629 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419597 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419538 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419651 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419606 | Pre-XDR-TB | lineage2.2.1 | by | SAMN02419675 | MDR-TB | lineage2.2.1 | by | ERR8665528 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232557 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232586 | MDR-TB | lineage2.2.1 | None | ERR8665781 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232778 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181329 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169143 | MDR-TB | lineage2.2.1 | None | SRR13232749 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162953 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163298 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180976 | MDR-TB | lineage2.2.1 | None | SRR1184035 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02058522 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232464 | MDR-TB | lineage2.2.1 | None | SRR7069695 | MDR-TB | lineage2.2.1 | None | ERR8665688 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159986 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172339 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163211 | MDR-TB | lineage2.2.1 | None | ERR5917749 | MDR-TB | lineage2.2.1 | by | ERR8665543 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917716 | Pre-XDR-TB | lineage2.2.1 | by | SRR7069238 | MDR-TB | lineage2.2.1 | None | ERR8665517 | MDR-TB | lineage2.2.1 | None | SRR7070112 | MDR-TB | lineage2.2.1 | None | SRR13232715 | MDR-TB | lineage2.2.1 | None | SRR1158988 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232743 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665695 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR6458441 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232700 | Pre-XDR-TB | lineage2.2.1 | None | SRR1158874 | MDR-TB | lineage2.2.1 | None | ERR8665566 | Pre-XDR-TB | lineage2.2.1 | None | SRR924718 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169135 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172072 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665529 | MDR-TB | lineage2.2.1 | None | ERR8665752 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665759 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665766 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166920 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232713 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232460 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169073 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163126 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665758 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232469 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159738 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181196 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232556 | XDR-TB | lineage2.2.1 | None | SRR1169045 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169101 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181103 | Pre-XDR-TB | lineage2.2.1 | None | SRR7069105 | MDR-TB | lineage2.2.1 | None | SRR13232515 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232684 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163177 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172449 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159861 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181155 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163432 | Pre-XDR-TB | lineage2.2.1 | None | SRR958483 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181307 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665714 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162531 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02058520 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169132 | MDR-TB | lineage2.2.1 | None | SRR1159262 | MDR-TB | lineage2.2.1 | None | ERR8665825 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665689 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163397 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159279 | MDR-TB | lineage2.2.1 | None | SRR1162485 | MDR-TB | lineage2.2.1 | None | ERR7975638 | MDR-TB | lineage2.2.1 | None | SRR1172117 | MDR-TB | lineage2.2.1 | None | SRR1163101 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181097 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180936 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181149 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159349 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181154 | MDR-TB | lineage2.2.1 | None | ERR8665683 | Pre-XDR-TB | lineage2.2.1 | None | SRR1168958 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458432 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665653 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458412 | Pre-XDR-TB | lineage2.2.1 | None | SRR29356758 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159083 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163314 | MDR-TB | lineage2.2.1 | None | SRR6458426 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665703 | Pre-XDR-TB | lineage2.2.1 | None | SRR7655469 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169144 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797223 | XDR-TB | lineage3.1.2 | in | SRR13232722 | MDR-TB | lineage2.2.1 | None | SRR1163081 | MDR-TB | lineage2.2.1 | None | SAMN02419640 | Pre-XDR-TB | lineage2.2.1 | by | SRR6458420 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665803 | MDR-TB | lineage2.2;lineage4.3.3 | None | ERR8665858 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665882 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665521 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665862 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR8665519 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665520 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665979 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665525 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665819 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665578 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665596 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665606 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665799 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665806 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665815 | XDR-TB | lineage2.2.1 | None | ERR8665817 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665818 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665832 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665902 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665912 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665916 | MDR-TB | lineage2.2.1 | None | ERR8665922 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665931 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665945 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665963 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665995 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665860 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR1159393 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232769 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163198 | MDR-TB | lineage2.2.1 | None | SRR13232564 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232751 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232781 | XDR-TB | lineage2.2.1 | None | SRR924712 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284525 | MDR-TB | lineage2.2.1 | None | SRR1180957 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267483 | Pre-XDR-TB | lineage2.2.1 | None | ERR4132457 | Pre-XDR-TB | lineage2.2.1 | None | SRR1168992 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183663 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665636 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665859 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458418 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174821 | MDR-TB | lineage2.2.1 | None | SRR1169128 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665615 | XDR-TB | lineage2.2.1 | None | SRR1163406 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163330 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796863 | Pre-XDR-TB | lineage3.1.2 | in | SRR13232549 | MDR-TB | lineage2.2.1 | None | ERR5917687 | MDR-TB | lineage2.2.1 | by | SRR1159150 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163405 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232738 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159661 | MDR-TB | lineage2.2.1 | None | ERR5917718 | Pre-XDR-TB | lineage2.2.1 | by | SRR1181093 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232506 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183962 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665644 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183959 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159003 | MDR-TB | lineage2.2.1 | None | SRR1159108 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665797 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159818 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184036 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458388 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163325 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169027 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665516 | MDR-TB | lineage2.2.1 | None | ERR8665661 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665749 | MDR-TB | lineage2.2.1 | None | SRR1169142 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232688 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665509 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163025 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181124 | MDR-TB | lineage2.2.1 | None | SRR7070436 | MDR-TB | lineage2.2.1 | None | SRR1181132 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665753 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172291 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232582 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232695 | Pre-XDR-TB | lineage2.2.1 | None | SRR958489 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232784 | MDR-TB | lineage2.2.1 | None | SRR1163336 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285183 | MDR-TB | lineage2.2.1 | None | SRR6458450 | MDR-TB | lineage2.2.1 | None | ERR8665635 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665795 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172387 | XDR-TB | lineage2.2.1 | None | SRR1172392 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174857 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665680 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232691 | MDR-TB | lineage2.2.1 | None | SRR1180963 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169074 | MDR-TB | lineage2.2.1 | None | ERR8665544 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232664 | MDR-TB | lineage2.2.1 | None | ERR8665740 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232677 | Pre-XDR-TB | lineage2.2.1 | None | SRR1169044 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232705 | Pre-XDR-TB | lineage2.2.1 | None | SRR1158990 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159121 | Pre-XDR-TB | lineage2.2.1 | None | SRR1159790 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458387 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
