lineage | Count |
---|---|
lineage4.9 | 4 |
lineage2.2.1 | 6 |
lineage4.1.1.3 | 1 |
lineage4.8 | 5 |
lineage5.2 | 2 |
La1.2 | 1 |
lineage4.3.2.1 | 2 |
lineage2.2.2 | 2 |
lineage4.3.3 | 1 |
lineage1.2.2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage6.1.3 | 1 |
spoligotype | Count |
---|---|
None | 27 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4769418 | Other | La1.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR9787153 | Other | lineage6.1.3 | None |
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