lineage | Count |
---|---|
lineage4.9 | 11 |
34 | |
lineage4 | 7 |
lineage4.3.2.1 | 1 |
lineage4.8 | 1 |
lineage4.6.1.1 | 3 |
lineage2.2.1 | 8 |
lineage4.3.3 | 6 |
lineage3.1 | 3 |
lineage2.1 | 2 |
lineage4.5 | 1 |
lineage4.1.1 | 1 |
lineage3 | 2 |
lineage4.3.4.1 | 1 |
lineage3.1.2 | 1 |
lineage3.1.1 | 1 |
lineage4.2.1.1 | 1 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769530 | RR-TB | lineage4.9 | None | SRR1172951 | Other | None | ERR4811022 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4798406 | HR-TB | None | ERR736848 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173400 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173629 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1175049 | RR-TB | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1710057 | Other | lineage2.1 | None | SRR1196768 | MDR-TB | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR21732980 | Other | lineage4.3.3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675550 | Other | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR4034769 | Other | lineage4.1.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR1035162 | Other | None | ERR2512606 | MDR-TB | lineage3 | None | SRR6044841 | Other | lineage4.9 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | SRR5341418 | Other | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | ERR2515032 | Other | lineage3 | None | ERR2653031 | Sensitive | lineage4.3.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046362 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046729 | Other | None | SRR6046482 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502889 | Other | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6832249 | Other | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR067681 | HR-TB | None | ERR1063855 | Other | lineage4 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR1063896 | Sensitive | None | ERR369151 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR133986 | HR-TB | None | ERR3439432 | Other | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None |
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