lineage | Count |
---|---|
lineage4 | 5 |
51 | |
lineage4.1.2.1 | 3 |
lineage4.6.2.2 | 1 |
lineage6.3.1 | 1 |
La3 | 1 |
lineage2 | 1 |
lineage4.3.3 | 2 |
lineage2.2.1 | 3 |
lineage3.1 | 2 |
lineage4.9 | 1 |
lineage4.5 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.3 | 1 |
lineage2.2 | 1 |
La1.8.1 | 1 |
spoligotype | Count |
---|---|
None | 77 |
ID | Drug resistance | Lineage | Country iso2 | SRR6046594 | HR-TB | lineage4 | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR3797036 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323043 | HR-TB | None | ERR3283027 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR736874 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736867 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702406 | HR-TB | None | ERR9786604 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169249 | Other | La3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1175049 | RR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172857 | MDR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675465 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3742665 | HR-TB | None | ERR176751 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | ERR176643 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR5341302 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR4819280 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None |
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