TB-Profiler
Home
Upload
SRA data
Rv1173
- c.1674C>T
Drug resistance types
9 Sensitive
0 RR-TB
8 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
8
lineage4.3.4.2.1
3
lineage4.8
3
lineage2.2.1
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
1
lineage3
1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
lineage4.9;lineage6.1.3
1
La3;lineage4.9
1
Showing 1 to 10 of 15 entries
Previous
1
2
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
28
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR11465414
Sensitive
lineage4.3.4.2.1
None
ERR11466149
Sensitive
lineage4.3.4.2.1
None
ERR11466150
Sensitive
lineage4.3.4.2.1
None
ERR161037
Other
lineage4.9
None
ERR161039
HR-TB
La3;lineage4.3.4
None
ERR181744
HR-TB
La3;lineage4.9
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
Showing 1 to 10 of 28 entries
Previous
1
2
3
Next