Rv3793 - c.-780C>G
Drug resistance types
1 Sensitive
0 RR-TB
8 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| 1 | |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.2.BCG | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 26 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1640750 | Other | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR8976043 | HR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None |
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