lineage | Count |
---|---|
lineage2.2.1 | 6 |
lineage3 | 1 |
lineage4.9 | 7 |
lineage4.1.1.3 | 1 |
lineage2.1;lineage4.1.4;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage4.3.2.1 | 2 |
lineage1.2.2.2 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 21 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6046594 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None |
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