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SRA data
Rv1630
- c.1218A>G
Drug resistance types
2 Sensitive
0 RR-TB
12 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
lineage2.2.1
6
lineage4.3.2.1
2
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
1
lineage4.3.3
1
lineage4.1.1.3
1
lineage3
1
lineage2.1;lineage4.1.4;lineage4.9
1
lineage1.2.2.2
1
Showing 1 to 9 of 9 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063858
HR-TB
lineage4.9
None
ERR1063862
HR-TB
lineage4.9
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR4800527
MDR-TB
lineage2.2.1
None
SRR12708392
Other
lineage2.2.1
None
SRR12708396
MDR-TB
lineage4.3.2.1
None
SRR12708407
HR-TB
lineage4.3.2.1
None
SRR12708409
HR-TB
lineage4.3.3
None
SRR12708411
HR-TB
lineage1.2.2.2
None
SRR12708413
HR-TB
lineage4.1.1.3
None
Showing 1 to 10 of 21 entries
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