Rv0006 - p.Asp94His
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
17 HR-TB
0 MDR-TB
357 Pre-XDR-TB
58 XDR-TB
32 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2 | 97 |
| lineage4.1.1.3 | 14 |
| lineage3 | 18 |
| lineage4.3.3 | 22 |
| lineage4.1.2.1 | 23 |
| lineage2.2.1 | 116 |
| lineage4.9 | 5 |
| lineage4.2.2.1 | 3 |
| lineage4.4.1.1 | 22 |
| lineage4.2.1 | 27 |
| lineage4 | 1 |
| lineage4.8 | 19 |
| lineage4.6.1.2 | 9 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.4 | 10 |
| lineage4.1.1.1 | 4 |
| lineage4.3.4.2 | 5 |
| lineage4.1.2 | 5 |
| lineage4.5 | 3 |
| lineage4.2.1.1 | 2 |
| lineage2.2.1.1 | 9 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.2.2.2 | 4 |
| lineage3.1;lineage4.8 | 1 |
| lineage2.1 | 4 |
| lineage4.3 | 2 |
| lineage4.4.1.1.1 | 4 |
| lineage4.7 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.4.2 | 3 |
| lineage1.1.2;lineage3.1.2 | 1 |
| lineage3.1 | 2 |
| lineage4.3.2 | 2 |
| La1.2.BCG | 1 |
| lineage4.3.1 | 1 |
| lineage3.1.1 | 5 |
| lineage4.1.1.3.1 | 1 |
| lineage4.1.2.1;lineage4.3.4 | 1 |
| lineage2.2.2;lineage4.1.2.1 | 1 |
| lineage4.6.3 | 2 |
| lineage4.2.2 | 1 |
| lineage4.6.5 | 1 |
| lineage2.2.1;lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 464 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173781 | Pre-XDR-TB | lineage2.2.2 | None | ERR13286119 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR26112035 | Other | lineage3 | None | ERR9993146 | XDR-TB | lineage4.1.1.3 | None | ERR13286153 | XDR-TB | lineage2.2.2 | None | ERR13288973 | Pre-XDR-TB | lineage2.2.2 | None | ERR13286179 | Pre-XDR-TB | lineage2.2.2 | None | ERR13288978 | Pre-XDR-TB | lineage2.2.2 | None | ERR13288955 | XDR-TB | lineage4.3.3 | None | ERR13286113 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992703 | XDR-TB | lineage2.2.2 | None | ERR8975760 | XDR-TB | lineage4.1.2.1 | None | ERR9992699 | XDR-TB | lineage2.2.2 | None | ERR13288792 | XDR-TB | lineage2.2.2 | None | SRR27107281 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8651649 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4553637 | Pre-XDR-TB | lineage4.9 | None | SRR13870367 | Pre-XDR-TB | lineage4.3.3 | None | SRR10380033 | Pre-XDR-TB | lineage2.2.1 | None | SRR16149142 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR114421 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR11972428 | Pre-XDR-TB | lineage2.2.1 | None | ERR6879046 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR10762441 | Pre-XDR-TB | lineage4.2.1 | None | ERR8773963 | Pre-XDR-TB | lineage4 | None | SRR25515050 | Other | lineage2.2.1 | None | SRR29056049 | Pre-XDR-TB | lineage2.2.2 | None | ERR11488516 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR16058404 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02350428 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4800684 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166312 | Pre-XDR-TB | lineage4.2.1 | None | SRR29274118 | Pre-XDR-TB | lineage4.8 | None | ERR13261383 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813823 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR22175254 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290287 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR5894885 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869264 | Pre-XDR-TB | lineage2.2.2 | None | ERR4799538 | Pre-XDR-TB | lineage3 | None | SRR1180392 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29093863 | Pre-XDR-TB | lineage2.2.2 | None | ERR8665786 | Pre-XDR-TB | lineage4.3.3 | None | ERR4872275 | XDR-TB | lineage4.2.1 | None | SRR1011464 | Pre-XDR-TB | lineage4.4.1.1 | None | SAMN02350423 | Pre-XDR-TB | lineage4.4.1.1 | za | SRR13232707 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488420 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488841 | XDR-TB | lineage4.3.4.2.1 | None | ERR13249429 | Other | lineage2.2.1 | None | SRR10092591 | Pre-XDR-TB | lineage4.1.4 | None | SRR25515509 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260504 | HR-TB | lineage2.2.1 | None | SRR18912549 | Other | lineage4.1.1.1 | None | ERR2653196 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR11773730 | Pre-XDR-TB | lineage2.2.2 | None | SRR16115862 | Other | lineage4.1.1.1 | None | SRR15316094 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025455 | Pre-XDR-TB | lineage2.2.1 | None | SRR9738530 | Pre-XDR-TB | lineage4.8 | None | SRR29050694 | Pre-XDR-TB | lineage4.1.2 | None | ERR13261345 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868701 | Other | lineage4.5 | None | SRR29539298 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR10305995 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266092 | Pre-XDR-TB | lineage2.2.1;lineage4 | None | ERR13289385 | HR-TB | lineage2.2.1 | None | SRR29273840 | Pre-XDR-TB | lineage4.8 | None | SRR25207088 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397185 | Pre-XDR-TB | lineage2.2.1 | None | SRR6848321 | XDR-TB | lineage4.1.4 | None | SRR13870369 | Pre-XDR-TB | lineage4.1.1 | None | SRR10341356 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511610 | HR-TB | lineage2.2.1 | None | SRR10828195 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662675 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173543 | Pre-XDR-TB | lineage2.2.2 | None | ERR5866492 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288885 | XDR-TB | lineage2.2.2 | None | ERR16022331 | Other | lineage4.5 | None | SRR12266248 | XDR-TB | lineage4.1.4 | None | SRR28888064 | XDR-TB | lineage2.2.1 | None | SRR29273913 | Pre-XDR-TB | lineage4.8 | None | ERR4831438 | Pre-XDR-TB | lineage3 | pk | ERR10748267 | XDR-TB | lineage2.2.2 | None | ERR3273182 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4796976 | XDR-TB | lineage4.2.2.2 | in | SRR29772594 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR1181217 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4799107 | XDR-TB | lineage4.8 | in | ERR4799172 | Pre-XDR-TB | lineage4.8 | in | ERR4797377 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13260531 | Pre-XDR-TB | lineage4.3.3 | None | ERR4797491 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR10315614 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971143 | XDR-TB | lineage2.2.2 | None | SRR29273874 | Pre-XDR-TB | lineage4.8 | None | SRR22424810 | Pre-XDR-TB | lineage4.8 | None | ERR11044216 | Other | lineage4.1.2.1 | None | ERR13288830 | XDR-TB | lineage4.1.1.3 | None | ERR4799263 | Pre-XDR-TB | lineage4.1.2.1 | in | ERR11488359 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796669 | HR-TB | lineage3.1;lineage4.8 | in | ERR4799794 | Pre-XDR-TB | lineage2.2.1 | in | SRR1165243 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02584661 | Pre-XDR-TB | lineage4.2.1 | md | ERR5987416 | Pre-XDR-TB | lineage2.2.2 | None | ERR752199 | Pre-XDR-TB | lineage2.2.1 | th | ERR10762242 | Pre-XDR-TB | lineage4.2.1 | None | SRR28351535 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156835 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831100 | Pre-XDR-TB | lineage4.3.3 | None | SRR6153127 | Other | lineage2.2.1 | ca | ERR11773728 | Pre-XDR-TB | lineage2.2.2 | None | ERR12916924 | XDR-TB | lineage2.2.1 | None | ERR4831483 | Pre-XDR-TB | lineage3 | None | SRR28888078 | XDR-TB | lineage2.2.1 | None | ERR8665877 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165256 | Pre-XDR-TB | lineage2.2.2 | None | SRR28888075 | XDR-TB | lineage2.2.1 | None | ERR9992887 | XDR-TB | lineage2.2.2 | None | ERR2516779 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2517032 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2517045 | Pre-XDR-TB | lineage4.4.1.1 | gb | ERR2515135 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2516064 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515609 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515584 | Pre-XDR-TB | lineage2.2.2 | za | SRR11828985 | Pre-XDR-TB | lineage2.1 | th | SRR5709748 | Pre-XDR-TB | lineage2.1 | th | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709932 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709801 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709918 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709889 | Pre-XDR-TB | lineage2.2.1 | th | SRR5551667 | Pre-XDR-TB | lineage4.8 | pg | ERR2041723 | Pre-XDR-TB | lineage4.2.2.1 | rs | SRR6824693 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR1062841 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8665710 | Pre-XDR-TB | lineage4.3.3 | None | SRR10869181 | Pre-XDR-TB | lineage2.2.2 | None | ERR1035042 | Pre-XDR-TB | lineage2.2.2 | za | ERR13292534 | Pre-XDR-TB | lineage4.2.1 | None | ERR13261463 | Pre-XDR-TB | lineage4.3 | None | SRR10869147 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02350489 | Pre-XDR-TB | lineage4.4.1.1.1 | za | SAMN02585966 | Pre-XDR-TB | lineage4.4.1.1 | za | SAMN02419570 | Pre-XDR-TB | lineage2.2.1 | by | SRR28888063 | XDR-TB | lineage2.2.1 | None | SRR16156822 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290288 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR24466800 | Pre-XDR-TB | lineage4.8 | None | ERR2515933 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515213 | Pre-XDR-TB | lineage2.2.2 | za | ERR2515199 | Pre-XDR-TB | lineage4.1.2.1 | za | ERR2515739 | Pre-XDR-TB | lineage4.1.2.1 | za | SRR28888070 | XDR-TB | lineage2.2.1 | None | ERR8976047 | XDR-TB | lineage2.2.1 | None | ERR4809320 | XDR-TB | lineage2.2.2 | za | SRR27107263 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4808997 | XDR-TB | lineage2.2.2 | za | ERR8976074 | Pre-XDR-TB | lineage2.2.2 | None | SRR25514906 | Other | lineage2.2.1 | None | ERR8976035 | Pre-XDR-TB | lineage2.2.2 | None | SRR11972357 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3287358 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR8665501 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119772 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9125253 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971116 | Pre-XDR-TB | lineage2.2.2 | None | SRR14807466 | XDR-TB | lineage2.2.1 | None | SRR25534237 | Other | lineage2.2.1 | None | SRR21031688 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488542 | Pre-XDR-TB | lineage4.3.3 | None | SRR13870406 | Pre-XDR-TB | lineage2.2.1 | None | SRR8758897 | Pre-XDR-TB | lineage4.7 | None | SRR18911984 | Other | lineage4.1.1.1 | None | ERR2653108 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR1723706 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR10748221 | Pre-XDR-TB | lineage2.2.2 | None | ERR13260884 | XDR-TB | lineage2.2.2 | None | ERR13276226 | Pre-XDR-TB | lineage4.2.1 | None | SRR29772623 | Pre-XDR-TB | lineage3.1.2 | None | SRR25206913 | Pre-XDR-TB | lineage2.2.2 | None | SRR29274217 | Pre-XDR-TB | lineage4.8 | None | ERR8025532 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992736 | XDR-TB | lineage2.2.2 | None | ERR5758323 | Pre-XDR-TB | lineage2.2.2 | None | DRR188805 | Other | lineage2.2.1 | None | ERR13285729 | Pre-XDR-TB | lineage4.2.1 | None | ERR13260955 | Pre-XDR-TB | lineage4.3 | None | SRR833034 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR5758416 | Pre-XDR-TB | lineage2.2.2 | None | SRR12142347 | HR-TB | lineage2.2.1 | None | SRR28858623 | Pre-XDR-TB | lineage4.1.4 | None | ERR3794505 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025720 | Pre-XDR-TB | lineage2.2.2 | None | SRR8758894 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025741 | Pre-XDR-TB | lineage2.2.2 | None | ERR5758369 | Pre-XDR-TB | lineage2.2.2 | None | SRR18213771 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29539017 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165498 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR4011065 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274157 | Pre-XDR-TB | lineage4.8 | None | SRR22248487 | Pre-XDR-TB | lineage4.8 | None | SRR9971343 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29017650 | Pre-XDR-TB | lineage4.9 | None | ERR9992684 | XDR-TB | lineage2.2.2 | None | ERR9992697 | XDR-TB | lineage4.1.1.3 | None | SRR13232542 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232693 | Pre-XDR-TB | lineage4.3.3 | None | ERR4799553 | HR-TB | lineage3.1.2.1 | None | SRR16058198 | HR-TB | lineage4.3.4.1 | None | SRR1181155 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055630 | XDR-TB | lineage2.2.2 | None | SRR6807700 | Pre-XDR-TB | lineage4.2.1 | None | ERR9806616 | Pre-XDR-TB | lineage2.2.2 | None | SRR10828205 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180301 | HR-TB | lineage3 | None | ERR13292416 | Other | lineage4.1.1.1 | None | SRR21031692 | Pre-XDR-TB | lineage2.2.1 | None | ERR13259987 | Pre-XDR-TB | lineage3 | None | ERR13260693 | Pre-XDR-TB | lineage4.3.3 | None | ERR4831103 | Pre-XDR-TB | lineage2.2.1 | None | SRR29053124 | Other | lineage3 | None | SRR29385467 | Other | lineage2.2.1 | None | ERR5897098 | Pre-XDR-TB | lineage3 | None | SRR29096855 | Pre-XDR-TB | lineage2.2.1 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | SRR1169089 | Pre-XDR-TB | lineage4.2.1 | None | SRR29051306 | Pre-XDR-TB | lineage4.3.3 | None | ERR3639795 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040216 | Pre-XDR-TB | lineage2.2.2 | None | ERR13286127 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13284159 | Pre-XDR-TB | lineage2.2.1 | None | SRR25340949 | Pre-XDR-TB | lineage1.1.2;lineage3.1.2 | None | ERR2510355 | Pre-XDR-TB | lineage2.2.1 | pk | ERR10610338 | Pre-XDR-TB | lineage2.2.2 | None | SRR14088372 | HR-TB | lineage3.1 | None | SRR29289133 | XDR-TB | lineage2.2.1 | None | ERR13285835 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380216 | Pre-XDR-TB | lineage4.3.3 | None | SRR22137412 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167167 | XDR-TB | lineage2.2.2 | None | ERR4797394 | Pre-XDR-TB | lineage4.8 | in | SRR29050883 | Pre-XDR-TB | lineage4.1.2 | None | ERR4799602 | Pre-XDR-TB | lineage2.2.1 | in | SRR29051258 | Pre-XDR-TB | lineage4.1.2 | None | SRR8651555 | Pre-XDR-TB | lineage4.4.2 | cn | SRR8217924 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800569 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4822392 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4798364 | Pre-XDR-TB | lineage3 | in | ERR7361990 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR4423137 | Pre-XDR-TB | lineage4.9 | None | SRR16087948 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02414854 | Pre-XDR-TB | lineage4.6.1.2 | se | SRR8651603 | Pre-XDR-TB | lineage2.2.1 | cn | SAMN02584650 | Pre-XDR-TB | lineage4.2.1 | md | ERR2184261 | Other | lineage4.4.1.1 | pe | ERR4813341 | Pre-XDR-TB | lineage4.1.1 | pe | SRR3743404 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774886 | Pre-XDR-TB | lineage2.2.2 | None | SRR28888065 | XDR-TB | lineage2.2.1 | None | ERR9907763 | Pre-XDR-TB | lineage4.3.2 | None | ERR5897088 | Pre-XDR-TB | lineage3 | None | SRR25534594 | Other | lineage2.2.1 | None | ERR4829548 | HR-TB | La1.2.BCG | it | ERR4830564 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830567 | XDR-TB | lineage2.2.2 | None | ERR502928 | Pre-XDR-TB | lineage2.2.1 | None | ERR4829923 | HR-TB | lineage4.3.1 | it | ERR775382 | Pre-XDR-TB | lineage2.2.1 | pe | ERR4830828 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4830790 | Pre-XDR-TB | lineage3.1.1 | et | ERR779901 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR4830818 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830823 | Pre-XDR-TB | lineage3.1.1 | et | ERR8975915 | XDR-TB | lineage4.8 | None | ERR8975480 | Pre-XDR-TB | lineage2.2.2 | None | SRR1167174 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971254 | XDR-TB | lineage2.2.2 | None | ERR2513352 | Pre-XDR-TB | lineage4.4.1.1 | gb | ERR2515872 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR18054787 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167291 | Pre-XDR-TB | lineage2.2.2 | None | ERR046917 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR9971019 | Pre-XDR-TB | lineage2.2.2 | None | ERR13290717 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992631 | XDR-TB | lineage2.2.2 | None | SRR29093380 | Pre-XDR-TB | lineage2.2.2 | None | SRR1165589 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR13266603 | Pre-XDR-TB | lineage2.2.1 | None | SRR25515373 | Other | lineage2.2.1 | None | ERR11488867 | XDR-TB | lineage4.3.4.2.1 | None | SAMN02053758 | Pre-XDR-TB | lineage4.4.1.1 | za | ERR11798765 | Pre-XDR-TB | lineage4.2.1 | None | ERR13266106 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266432 | Pre-XDR-TB | lineage3 | None | SRR29016887 | Pre-XDR-TB | lineage4.9 | None | ERR13290286 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR4813098 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4813822 | Pre-XDR-TB | lineage4.1.2.1;lineage4.3.4 | None | SRR29273855 | Pre-XDR-TB | lineage4.8 | None | SRR20969545 | Pre-XDR-TB | lineage2.2.1 | None | SRR16087878 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR9993258 | XDR-TB | lineage4.4.1.1.1 | None | SRR1140929 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR1873485 | Pre-XDR-TB | lineage2.2.2 | za | SRR10379983 | Pre-XDR-TB | lineage4.2.1 | None | ERR2652914 | Other | lineage4.1.1.3 | None | SRR7585432 | Pre-XDR-TB | lineage3 | in | ERR4813820 | Pre-XDR-TB | lineage4.3.2 | None | SRR21576540 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992862 | XDR-TB | lineage2.2.2 | None | ERR11488543 | Pre-XDR-TB | lineage4.3.3 | None | ERR9125692 | HR-TB | lineage4.3.4.1 | None | SRR1173432 | Pre-XDR-TB | lineage2.2.2 | None | ERR10762256 | Pre-XDR-TB | lineage4.2.1 | None | SRR1162753 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR8665785 | Pre-XDR-TB | lineage4.3.3 | None | ERR8773961 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180314 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR10748084 | Pre-XDR-TB | lineage2.2.2 | None | ERR2653112 | Pre-XDR-TB | lineage4.8 | None | SRR14802222 | Pre-XDR-TB | lineage4.2.1 | None | ERR9992854 | XDR-TB | lineage4.1.2.1 | None | SRR1062836 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR13289276 | XDR-TB | lineage4.1.2.1 | None | SRR23252659 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR13286213 | Pre-XDR-TB | lineage2.2.2 | None | ERR5918046 | XDR-TB | lineage4.1.1.3 | za | ERR5918121 | XDR-TB | lineage2.2.2 | za | ERR4808984 | Pre-XDR-TB | lineage2.2.2 | za | SRR10808382 | Other | lineage4.4.1.1 | None | ERR3287504 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR8976115 | Pre-XDR-TB | lineage2.2.2 | None | ERR5918117 | Pre-XDR-TB | lineage2.2.2 | za | SRR28351439 | Pre-XDR-TB | lineage3 | None | SRR833175 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR21277140 | Other | lineage4.4.2 | None | ERR13260865 | XDR-TB | lineage2.2.2 | None | ERR11488431 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969467 | Pre-XDR-TB | lineage2.1 | None | SRR11715716 | Pre-XDR-TB | lineage2.1 | None | ERR9993019 | XDR-TB | lineage2.2.2 | None | SRR13583472 | Pre-XDR-TB | lineage4.1.2 | None | SRR15506912 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025769 | Pre-XDR-TB | lineage2.2.2 | None | SRR29274040 | Pre-XDR-TB | lineage4.2.1 | None | SRR29096836 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992721 | XDR-TB | lineage2.2.2 | None | SRR1166711 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR2864261 | HR-TB | lineage2.2.1 | None | ERR13288833 | Pre-XDR-TB | lineage2.2.2 | None | ERR13260895 | Pre-XDR-TB | lineage2.2.2;lineage4.1.2.1 | None | SRR9971255 | XDR-TB | lineage2.2.2 | None | SRR9971329 | XDR-TB | lineage2.2.2 | None | SRR1181106 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800165 | Pre-XDR-TB | lineage4.3.3 | None | ERR13260885 | Pre-XDR-TB | lineage2.2.2 | None | SRR18714928 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285324 | Other | lineage4.6.3 | None | SRR29093493 | Pre-XDR-TB | lineage2.2.2 | None | ERR13260494 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488341 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288977 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181196 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315584 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR25534366 | Other | lineage2.2.1 | None | SRR10869207 | Pre-XDR-TB | lineage2.2.2 | None | SRR29539314 | Pre-XDR-TB | lineage2.2.1 | None | SRR28888067 | XDR-TB | lineage2.2.1 | None | SAMN02403471 | Pre-XDR-TB | lineage2.2.2 | None | SRR12266250 | Pre-XDR-TB | lineage4.1.4 | None | SRR12266252 | Pre-XDR-TB | lineage4.1.4 | None | SRR12266251 | XDR-TB | lineage4.1.4 | None | ERR8665502 | Pre-XDR-TB | lineage2.2.1 | None | ERR11049956 | Other | lineage4.1.2.1 | None | SRR1019168 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR26112443 | Other | lineage4.1.1 | None | SRR23310943 | Pre-XDR-TB | lineage4.2.1 | None | ERR11044238 | Pre-XDR-TB | lineage4.2.1 | None | SRR25207099 | Pre-XDR-TB | lineage2.2.1 | None | SRR12266249 | Pre-XDR-TB | lineage4.1.4 | None | SRR12266253 | Pre-XDR-TB | lineage4.1.4 | None | SRR13870409 | Pre-XDR-TB | lineage4.1.4 | None | ERR13260503 | HR-TB | lineage2.2.1 | None | ERR13291186 | Other | lineage3 | None | ERR9286028 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR29093379 | Pre-XDR-TB | lineage2.2.1 | None | SRR10379953 | XDR-TB | lineage4.2.1 | None | SRR21689820 | Other | lineage4.6.3 | None | ERR16022261 | Other | lineage4.5 | None | SRR13180223 | HR-TB | lineage3 | None | SRR21887655 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567808 | Pre-XDR-TB | lineage2.2.1 | None | SRR29385500 | Other | lineage2.2.1 | None | ERR4796566 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796813 | Pre-XDR-TB | lineage2.2.1 | in | SRR29051010 | Pre-XDR-TB | lineage4.1.2 | None | SRR1166105 | Pre-XDR-TB | lineage4.2.1 | None | ERR5897100 | Pre-XDR-TB | lineage3 | None | ERR4799349 | Pre-XDR-TB | lineage4.2.2 | in | ERR4872344 | XDR-TB | lineage2.2.1 | None | ERR8665711 | Pre-XDR-TB | lineage4.3.3 | None | ERR4797695 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5866491 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | ERR13290289 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR11082734 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11488331 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13261537 | Pre-XDR-TB | lineage4.8 | None | ERR4553650 | Pre-XDR-TB | lineage4.9 | None | SRR28045691 | XDR-TB | lineage4.1.1.3 | None | SRR5306022 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812697 | HR-TB | lineage4.1.1.3 | pe | SRR28435004 | Pre-XDR-TB | lineage2.2.1 | None | ERR11774889 | Pre-XDR-TB | lineage2.2.2 | None | ERR11773753 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808978 | Pre-XDR-TB | lineage2.2.2 | None | ERR11774880 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917668 | Pre-XDR-TB | lineage4.3.3 | by | ERR5918010 | Pre-XDR-TB | lineage2.2.2 | za | ERR7911575 | Pre-XDR-TB | lineage2.2.2 | za | ERR8665613 | Pre-XDR-TB | lineage4.3.3 | None | ERR1679638 | Pre-XDR-TB | lineage4.6.5 | ng | ERR4813110 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4813112 | Pre-XDR-TB | lineage4.3.3 | pe | ERR4830816 | Pre-XDR-TB | lineage3.1.1 | et | ERR4830817 | Pre-XDR-TB | lineage3.1.1 | et | ERR4829722 | Pre-XDR-TB | lineage4.2.1 | it | ERR4829129 | HR-TB | lineage3.1 | None | ERR7911047 | Pre-XDR-TB | lineage4.2.1 | md | ERR4813111 | Pre-XDR-TB | lineage4.3.3 | pe | SRR22424795 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743377 | Pre-XDR-TB | lineage4.2.1 | None | SRR24799245 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR227986 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR2510437 | Pre-XDR-TB | lineage3 | None | ERR552810 | Other | lineage4.1.2.1 | de | SRR2100392 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR2101344 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873528 | Pre-XDR-TB | lineage2.2.2 | za | ERR1034783 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR067752 | Pre-XDR-TB | lineage4.2.1 | ru | SRR25515148 | Pre-XDR-TB | lineage2.2.1 | None | SRR22137431 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292546 | Pre-XDR-TB | lineage4.2.1 | None | SRR24827306 | Other | lineage3 | None | SAMN02403472 | Pre-XDR-TB | lineage2.2.2 | za | SRR10315615 | Pre-XDR-TB | lineage2.2.2 | None | SRR11734768 | Pre-XDR-TB | lineage2.2.1 | None | SRR22461600 | Pre-XDR-TB | lineage4.3.3 | None | ERR9993238 | XDR-TB | lineage2.2.2 | None | ERR11489066 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13289370 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510654 | Pre-XDR-TB | lineage2.2.1 | it | SRR1169060 | Pre-XDR-TB | lineage4.2.1 | None | ERR13286107 | Pre-XDR-TB | lineage2.2.2 | None | ERR10762296 | Pre-XDR-TB | lineage2.2.1 | None |
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