lineage | Count |
---|---|
lineage4.8 | 11 |
lineage4.3.4.2 | 13 |
lineage3;lineage2.2.1 | 1 |
lineage2.2.1 | 19 |
lineage4.3.4 | 1 |
lineage2.2.2 | 2 |
lineage4.3.4.2.1 | 1 |
lineage2.2.1.1 | 2 |
lineage4.1.2.1 | 1 |
lineage3.1.1 | 1 |
lineage2.1 | 2 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796609 | Pre-XDR-TB | lineage4.8 | in | ERR4553722 | MDR-TB | lineage4.8 | None | ERR4796681 | Pre-XDR-TB | lineage4.8 | in | ERR4797780 | Pre-XDR-TB | lineage4.8 | in | ERR4797349 | Pre-XDR-TB | lineage4.8 | in | ERR4797577 | MDR-TB | lineage4.8 | in | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4798515 | Pre-XDR-TB | lineage4.8 | in | ERR4799283 | Pre-XDR-TB | lineage4.8 | in | ERR4799172 | Pre-XDR-TB | lineage4.8 | in | ERR751574 | MDR-TB | lineage4.3.4.2 | pe | ERR4799570 | Pre-XDR-TB | lineage3;lineage2.2.1 | in | ERR7911153 | MDR-TB | lineage2.2.1 | vn | ERR7911448 | MDR-TB | lineage4.3.4.2 | za | SRR10315649 | MDR-TB | lineage4.3.4.2 | None | ERR8665607 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315650 | MDR-TB | lineage4.3.4.2 | None | SRR10315651 | MDR-TB | lineage4.3.4.2 | None | ERR2516785 | MDR-TB | lineage2.2.1 | gb | SRR1175056 | MDR-TB | lineage4.3.4 | None | SRR11786870 | MDR-TB | lineage2.2.1 | None | SRR1196479 | MDR-TB | lineage4.3.4.2 | None | SRR15316061 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277571 | Pre-XDR-TB | lineage2.2.2 | None | ERR2515389 | MDR-TB | lineage4.3.4.2.1 | za | SAMN02586003 | MDR-TB | lineage4.3.4.2 | za | SRR10380204 | MDR-TB | lineage2.2.1 | None | SRR1172851 | MDR-TB | lineage4.3.4.2 | None | SRR1184351 | MDR-TB | lineage4.3.4.2 | None | SRR14519940 | MDR-TB | lineage2.2.1.1 | None | SRR15315980 | RR-TB | lineage2.2.1 | None | SRR16370369 | MDR-TB | lineage2.2.1 | None | ERR11081608 | MDR-TB | lineage4.1.2.1 | None | ERR2516887 | MDR-TB | lineage2.2.1 | gb | ERR4827464 | MDR-TB | lineage2.2.1 | None | ERR4827986 | MDR-TB | lineage2.2.1 | None | ERR4827451 | MDR-TB | lineage2.2.1 | None | ERR4827568 | MDR-TB | lineage2.2.1 | None | ERR4827943 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827569 | MDR-TB | lineage2.2.1 | None | ERR4827576 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485054 | Sensitive | lineage4.8 | None | ERR4830471 | MDR-TB | lineage4.3.4.2 | za | ERR4828102 | MDR-TB | lineage2.2.1 | None | SRR6785297 | MDR-TB | lineage2.2.1 | None | ERR3077966 | MDR-TB | lineage3.1.1 | None | SRR9971310 | MDR-TB | lineage4.3.4.2 | None | SRR9971388 | MDR-TB | lineage4.3.4.2 | None | DRR130078 | Pre-XDR-TB | lineage2.1 | None | SRR9970992 | MDR-TB | lineage4.3.4.2 | None | DRR130077 | Pre-XDR-TB | lineage2.1 | None | ERR11044531 | MDR-TB | lineage2.2.1 | None | ERR11044657 | MDR-TB | lineage2.2.1 | None | ERR3273105 | MDR-TB | lineage2.2.1.1 | None |
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