EBG00000313325 - n.908A>C
Drug resistance types
5 Sensitive
2 RR-TB
24 HR-TB
64 MDR-TB
27 Pre-XDR-TB
1 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2.2 | 3 |
| lineage3.1.1 | 3 |
| lineage3 | 10 |
| lineage1.2.1.2 | 7 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.2.1 | 1 |
| lineage1.1.1.1 | 6 |
| lineage4.3.4.2.1 | 15 |
| lineage4.8 | 11 |
| lineage1.2.1.2.1 | 5 |
| lineage4.6.1.2 | 9 |
| lineage4.3.3 | 5 |
| lineage4.4.2 | 5 |
| lineage2.2.2 | 4 |
| lineage2.2.1 | 5 |
| lineage4.1.1.3 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.2.2.2 | 5 |
| lineage3.1.3 | 1 |
| 5 | |
| lineage4.6.2.2 | 2 |
| lineage1.1.2 | 7 |
| lineage4.5 | 1 |
| lineage4.8.1;lineage4.6.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.3.4.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 124 |
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2124092 | HR-TB | lineage1.2.2.2 | None | SAMN02403540 | MDR-TB | lineage3.1.1 | za | ERR2510604 | Pre-XDR-TB | lineage3 | pk | ERR4816817 | Other | lineage3 | gb | ERR2510600 | Pre-XDR-TB | lineage3 | pk | ERR4817940 | HR-TB | lineage1.2.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SRR5074075 | HR-TB | lineage4.1.2.1 | vn | ERR2517065 | Pre-XDR-TB | lineage4.2.1 | gb | SRR5073939 | HR-TB | lineage1.1.1.1 | vn | SAMN02381010 | MDR-TB | lineage4.3.4.2.1 | None | ERR2510271 | MDR-TB | lineage3 | pk | ERR2516604 | MDR-TB | lineage3 | nl | SRR6339666 | HR-TB | lineage4.8 | au | ERR2843437 | Sensitive | lineage1.2.1.2.1 | None | ERR4828507 | Sensitive | lineage1.2.1.2.1 | None | ERR2707012 | MDR-TB | lineage4.6.1.2 | cd | ERR4828499 | Sensitive | lineage1.2.1.2.1 | vn | SRR6485031 | MDR-TB | lineage4.3.3 | None | ERR4830967 | Pre-XDR-TB | lineage4.1.2.1 | np | SRR6152933 | HR-TB | lineage1.2.1.2.1 | ca | ERR4831051 | MDR-TB | lineage4.8 | np | SRR6930927 | MDR-TB | lineage1.2.1.2 | None | SRR6797539 | HR-TB | lineage3 | None | SRR6785493 | MDR-TB | lineage4.3.3 | None | SRR7496485 | HR-TB | lineage1.1.1.1 | us | ERR3132234 | HR-TB | lineage1.2.2.2 | None | SRR7496483 | HR-TB | lineage1.1.1.1 | None | SRR8651643 | MDR-TB | lineage4.4.2 | cn | SRR8651625 | MDR-TB | lineage4.4.2 | cn | SRR7496486 | HR-TB | lineage1.1.1.1 | us | SRR9613552 | MDR-TB | lineage2.2.2 | None | SAMN02380998 | MDR-TB | lineage4.6.1.2 | ug | SRR7535045 | MDR-TB | lineage4.3.4.2.1 | None | SRR7765063 | Pre-XDR-TB | lineage4.8 | None | ERR038745 | MDR-TB | lineage4.3.4.2.1 | ug | DRR130159 | RR-TB | lineage2.2.1 | None | DRR130165 | Pre-XDR-TB | lineage2.2.2 | None | ERR040134 | MDR-TB | lineage4.3.4.2.1 | ug | ERR038744 | MDR-TB | lineage4.3.4.2.1 | ug | ERR038737 | MDR-TB | lineage4.3.4.2.1 | ug | ERR3256127 | MDR-TB | lineage4.1.1.3 | ph | ERR3256128 | MDR-TB | lineage4.1.1.3 | ph | ERR10680194 | MDR-TB | lineage4.8 | None | ERR11043259 | MDR-TB | lineage4.1.2.1 | None | ERR133858 | MDR-TB | lineage4.2.1.1 | ru | ERR4796768 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR3287611 | MDR-TB | lineage4.3.3 | pe | ERR3335761 | Pre-XDR-TB | lineage3.1.3 | pk | ERR3335802 | MDR-TB | lineage3 | pk | ERR4553459 | MDR-TB | None | ERR4553496 | MDR-TB | None | ERR4553523 | MDR-TB | None | ERR4423782 | MDR-TB | lineage4.6.2.2 | None | ERR4553713 | MDR-TB | lineage4.8 | None | ERR4553775 | Pre-XDR-TB | lineage4.8 | None | ERR4796343 | XDR-TB | lineage4.8 | in | ERR4796570 | MDR-TB | lineage3 | in | ERR4799172 | Pre-XDR-TB | lineage4.8 | in | ERR4797292 | Pre-XDR-TB | lineage4.8 | in | ERR4799163 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4798277 | HR-TB | lineage1.2.2.2 | in | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4799930 | Pre-XDR-TB | lineage1.1.2 | in | ERR4799476 | HR-TB | lineage4.2.2.2 | in | ERR4799336 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR4799563 | Pre-XDR-TB | lineage1.1.2 | in | ERR4811305 | RR-TB | lineage4.5 | cn | ERR4800284 | Pre-XDR-TB | lineage3 | in | ERR6336796 | MDR-TB | lineage1.2.1.2 | None | ERR5865683 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865684 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866510 | MDR-TB | lineage4.3.3 | None | ERR6336804 | HR-TB | lineage1.2.1.2 | None | ERR6336801 | HR-TB | lineage1.2.1.2 | None | ERR6359089 | MDR-TB | lineage4.6.1.2 | None | ERR6359054 | MDR-TB | lineage4.6.1.2 | None | ERR6358743 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR6358762 | MDR-TB | lineage4.8.1;lineage4.6.1.2 | None | ERR7911507 | MDR-TB | lineage2.2.1 | vn | ERR8774514 | MDR-TB | lineage4.6.2.2 | None | ERR9125848 | HR-TB | lineage1.1.1.1 | None | ERR9125825 | HR-TB | lineage1.2.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR9907714 | MDR-TB | lineage4.3.3 | None | ERR987706 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062888 | MDR-TB | lineage4.6.1.2 | None | SRR1049599 | MDR-TB | lineage4.6.1.2 | None | SRR1049600 | MDR-TB | lineage4.6.1.2 | None | SRR1049624 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049625 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140717 | MDR-TB | lineage4.6.1.2 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140750 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11567784 | MDR-TB | lineage4.4.2 | None | SRR11567785 | MDR-TB | lineage4.4.2 | None | SRR1175300 | HR-TB | lineage1.1.2 | None | SRR11567783 | MDR-TB | lineage4.4.2 | None | SRR1166324 | Pre-XDR-TB | lineage4.1.2.1 | ro | SRR1169227 | MDR-TB | lineage3.1.1 | None | SRR1167370 | MDR-TB | lineage3.1.1 | None | SRR1169253 | MDR-TB | lineage4.4.1.1.1 | None | SRR1172853 | HR-TB | lineage1.1.2 | None | SRR11972177 | Pre-XDR-TB | None | SRR12199474 | Sensitive | lineage1.1 | None | SRR11972442 | MDR-TB | lineage1.1.3 | None | SRR16058487 | HR-TB | lineage1.1.1.1 | None | SRR14164427 | Sensitive | lineage1.1.2 | None | SRR16057944 | HR-TB | lineage1.2.1.2 | None | SRR22175173 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR16089912 | HR-TB | lineage4.8 | None | SRR18054800 | MDR-TB | lineage2.2.2 | None | SRR19320495 | HR-TB | lineage1.2.1.2.1 | None | ERR4813844 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR4813825 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR22424788 | MDR-TB | lineage1.1.2 | None | ERR11081374 | MDR-TB | lineage2.2.1 | None | SRR21887643 | MDR-TB | lineage2.2.2 | None | SRR3105746 | Pre-XDR-TB | None | SRR3105756 | Pre-XDR-TB | lineage3 | None | SAMN02599159 | HR-TB | lineage1.1.2 | in |
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