Rv2043c - c.391dupG


Drug resistance types
0 Sensitive 3 RR-TB 2 HR-TB 69 MDR-TB 111 Pre-XDR-TB 9 XDR-TB 2 Other
lineage Counts
lineage Count
lineage2.2.1 91
lineage4.8 16
lineage4.2.1 4
lineage4.1.2.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage3 13
lineage2.2.1.1 4
lineage4.3.4.1 2
lineage4.6.2.2 2
lineage3.1.2 2
lineage2.2.1;lineage4.8 2
lineage4.3.3 10
lineage4.4 1
lineage1.2.2.2 4
lineage2.2.1;lineage4.3.3 1
lineage1.1 1
lineage2.2.1;lineage3 1
lineage4.1.1.3 5
lineage2.2.1.2 1
lineage1.1.2 6
lineage3;lineage4 1
lineage1.1.1.1;lineage2.2.1 1
lineage2.2.1;lineage4 1
lineage4.3.2.1 2
lineage1.1.2;lineage2.2.1 1
lineage1.2.1.2.1 2
lineage1.1.1 1
lineage1.1.3.1 3
lineage1.1.2;lineage3.1.2 1
lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 1
lineage1.1.3.3 1
lineage2.2.2 2
1
lineage4.5 2
lineage1.1.3 1
lineage4.2.2.2 1
lineage4.3.4.2 2
lineage5.2 1
lineage4.1.3 1
lineage4.7 1
spoligotype Counts
spoligotype Count
None 196
Geographic prevalence
Country level data for this variant is available for 56 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2307715 Pre-XDR-TB lineage2.2.1 None
SRR1146347 Pre-XDR-TB lineage4.8 None
ERR562809 MDR-TB lineage2.2.1 None
SRR22175213 XDR-TB lineage2.2.1 None
SRR14782609 Pre-XDR-TB lineage4.2.1 None
SRR8380948 MDR-TB lineage4.8 in
ERR11551990 MDR-TB lineage4.1.2.1 None
SRR20969664 XDR-TB lineage2.2.1 None
ERR4799436 Pre-XDR-TB lineage2.2.1 in
SRR24256223 Pre-XDR-TB lineage2.2.1 None
SRR14782638 HR-TB lineage2.2.1;lineage4.1.2.1 None
ERR5864795 Pre-XDR-TB lineage2.2.1 None
SRR18714836 Pre-XDR-TB lineage2.2.1 None
SRR7585411 MDR-TB lineage3 in
ERR983230 Pre-XDR-TB lineage2.2.1.1 None
ERR4553888 MDR-TB lineage4.8 None
SRR10380170 MDR-TB lineage2.2.1 None
SRR11662352 Pre-XDR-TB lineage2.2.1 None
SRR5153223 Pre-XDR-TB lineage2.2.1 None
SRR27107300 Pre-XDR-TB lineage4.3.4.1 None
ERR4800497 Pre-XDR-TB lineage2.2.1 in
SRR1163046 Pre-XDR-TB lineage4.8 None
ERR4799787 MDR-TB lineage3 None
ERR4797859 Pre-XDR-TB lineage2.2.1 in
SRR6831710 MDR-TB lineage2.2.1 None
SRR11662562 Pre-XDR-TB lineage2.2.1 None
ERR5865861 Pre-XDR-TB lineage2.2.1 None
ERR4799171 Pre-XDR-TB lineage4.8 None
SRR5535825 MDR-TB lineage4.6.2.2 None
ERR4799302 Pre-XDR-TB lineage2.2.1 in
SRR6832144 MDR-TB lineage2.2.1 None
SRR25207043 MDR-TB lineage2.2.1 None
ERR4797898 XDR-TB lineage2.2.1 in
SRR10305964 MDR-TB lineage2.2.1 None
ERR4796832 Pre-XDR-TB lineage3.1.2 in
SRR25827780 XDR-TB lineage2.2.1;lineage4.8 None
SRR1144769 Pre-XDR-TB lineage4.8 None
SRR25207037 Pre-XDR-TB lineage2.2.1 None
ERR8665527 Pre-XDR-TB lineage4.3.3 None
SRR25207145 Pre-XDR-TB lineage2.2.1 None
ERR5865727 MDR-TB lineage2.2.1 None
ERR2307364 Pre-XDR-TB lineage2.2.1 None
ERR067612 RR-TB lineage4.3.3 ru
SRR15315964 Pre-XDR-TB lineage4.4 None
ERR11081103 MDR-TB lineage2.2.1 None
ERR4800360 Pre-XDR-TB lineage2.2.1 in
SRR15014714 MDR-TB lineage4.8 None
ERR5864797 Pre-XDR-TB lineage2.2.1 None
SRR14802111 MDR-TB lineage2.2.1 None
ERR5865936 MDR-TB lineage2.2.1 None
SRR25340788 MDR-TB lineage1.2.2.2 None
SRR16088069 Pre-XDR-TB lineage2.2.1;lineage4.3.3 None
ERR4797401 Pre-XDR-TB lineage3 in
SRR23310932 XDR-TB lineage4.2.1 None
SRR23861895 Pre-XDR-TB lineage2.2.1 None
ERR11043927 MDR-TB lineage2.2.1 None
SRR5709792 Pre-XDR-TB lineage1.1 th
SRR3105742 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4813855 Pre-XDR-TB lineage4.3.3 br
ERR11465549 MDR-TB lineage4.1.1.3 None
SRR28045921 Pre-XDR-TB lineage4.1.1.3 None
SRR28351277 MDR-TB lineage4.8 None
SRR28045448 RR-TB lineage2.2.1.2 None
ERR3335753 RR-TB lineage1.1.2 pk
ERR4829130 Pre-XDR-TB lineage1.2.2.2 pk
ERR4829940 Pre-XDR-TB lineage3;lineage4 pk
ERR4829971 Pre-XDR-TB lineage3 pk
ERR10748289 MDR-TB lineage2.2.1.1 None
ERR4796509 Pre-XDR-TB lineage2.2.1 in
SRR11662693 Pre-XDR-TB lineage1.1.1.1;lineage2.2.1 None
SRR25340938 MDR-TB lineage1.1.2 None
SRR16087929 Pre-XDR-TB lineage4.3.3 None
ERR4798194 MDR-TB lineage1.2.2.2 in
SRR3743435 Pre-XDR-TB lineage4.2.1 None
ERR5864794 Pre-XDR-TB lineage2.2.1 None
SRR25827430 Pre-XDR-TB lineage2.2.1;lineage4 None
ERR4797975 Pre-XDR-TB lineage2.2.1 in
ERR4798997 Pre-XDR-TB lineage2.2.1 None
SRR2024988 Pre-XDR-TB lineage2.2.1 cn
ERR4799428 MDR-TB lineage3 in
ERR4809304 XDR-TB lineage4.3.2.1 za
SRR25389483 Pre-XDR-TB lineage2.2.1 None
SRR25206892 Pre-XDR-TB lineage2.2.1.1 None
ERR4830846 Pre-XDR-TB lineage1.1.2 None
SRR22249657 Other lineage2.2.1 None
ERR11083131 MDR-TB lineage4.3.3 None
ERR5866103 Pre-XDR-TB lineage4.3.3 None
ERR5864801 Pre-XDR-TB lineage2.2.1 None
ERR5864799 Pre-XDR-TB lineage2.2.1 None
ERR4800221 HR-TB lineage1.1.2;lineage2.2.1 in
ERR5864796 Pre-XDR-TB lineage2.2.1 None
SRR26936956 MDR-TB lineage2.2.1 None
ERR4830937 Pre-XDR-TB lineage2.2.1 np
ERR5864800 Pre-XDR-TB lineage2.2.1 None
ERR067724 Pre-XDR-TB lineage2.2.1 ru
SRR25207386 MDR-TB lineage2.2.1 None
SRR1723838 Pre-XDR-TB lineage2.2.1 cn
ERR4799519 Pre-XDR-TB lineage2.2.1 in
SRR16058383 MDR-TB lineage1.2.1.2.1 None
ERR8665725 Pre-XDR-TB lineage4.3.3 None
ERR4799172 Pre-XDR-TB lineage4.8 in
SRR25827503 Pre-XDR-TB lineage2.2.1 None
SRR25827401 Pre-XDR-TB lineage2.2.1 None
SRR14088352 Pre-XDR-TB lineage1.2.2.2 None
ERR2707153 MDR-TB lineage4.3.3 cd
ERR6866468 MDR-TB lineage4.3.4.1 None
ERR4798283 Pre-XDR-TB lineage3.1.2 in
ERR5865862 Pre-XDR-TB lineage2.2.1 None
SRR6824615 Pre-XDR-TB lineage2.2.1 cn
ERR2307650 Pre-XDR-TB lineage2.2.1 None
ERR2707156 MDR-TB lineage4.3.3 cd
SRR21576585 MDR-TB lineage2.2.1 None
ERR5864802 Pre-XDR-TB lineage2.2.1 None
ERR2516665 Pre-XDR-TB lineage2.2.1 pe
ERR11043921 Pre-XDR-TB lineage2.2.1 None
SRR1162958 Pre-XDR-TB lineage4.8 None
DRR130114 Pre-XDR-TB lineage2.2.1 None
SRR5709916 MDR-TB lineage1.1.1 th
SRR22424755 Pre-XDR-TB lineage2.2.1 None
SRR26056436 MDR-TB lineage1.1.3.1 None
SRR16087918 MDR-TB lineage2.2.1 None
ERR4796771 Pre-XDR-TB lineage2.2.1 in
SRR13243561 Pre-XDR-TB lineage2.2.1 None
ERR5864798 Pre-XDR-TB lineage2.2.1 None
SRR10430383 Pre-XDR-TB lineage2.2.1 None
SRR25827695 MDR-TB lineage1.1.2;lineage3.1.2 None
SRR20969572 XDR-TB lineage2.2.1 None
ERR4798816 Pre-XDR-TB lineage2.2.1;lineage3;lineage4.1.1.3;lineage4.9 in
SRR28045652 MDR-TB lineage1.1.3.3 None
SRR28706493 MDR-TB lineage2.2.1 None
SRR28045565 Pre-XDR-TB lineage2.2.1 None
SRR28706472 MDR-TB lineage2.2.1 None
SRR28923833 MDR-TB lineage2.2.2 None
SRR28045054 Pre-XDR-TB lineage2.2.1.1 None
SRR25827453 MDR-TB None
ERR2510429 MDR-TB lineage1.1.2 pk
ERR2510600 Pre-XDR-TB lineage3 pk
ERR2510604 Pre-XDR-TB lineage3 pk
ERR2510614 Pre-XDR-TB lineage3 pk
ERR5897072 Pre-XDR-TB lineage3 None
ERR5897093 MDR-TB lineage2.2.1;lineage4.8 None
ERR5897098 Pre-XDR-TB lineage3 None
ERR5897100 Pre-XDR-TB lineage3 None
ERR5897116 Pre-XDR-TB lineage4.5 None
ERR5897117 Pre-XDR-TB lineage4.5 None
ERR9125281 MDR-TB lineage1.2.1.2.1 None
ERR4827921 MDR-TB lineage2.2.1 None
SRR25389481 Pre-XDR-TB lineage2.2.1 None
ERR11798668 Pre-XDR-TB lineage4.2.1 None
SRR25207304 XDR-TB lineage2.2.1 None
SRR25827302 MDR-TB lineage4.8 None
SRR26937041 MDR-TB lineage2.2.1 None
ERR4799472 Pre-XDR-TB lineage2.2.1 in
ERR11043466 MDR-TB lineage4.8 None
ERR7911276 MDR-TB lineage2.2.1 vn
ERR4797399 Pre-XDR-TB lineage2.2.1 in
ERR4553897 Pre-XDR-TB lineage4.8 None
ERR4553760 MDR-TB lineage1.1.3 None
ERR11465548 MDR-TB lineage4.1.1.3 None
ERR4872080 MDR-TB lineage4.8 None
SRR7585422 Pre-XDR-TB lineage4.2.2.2 in
ERR4798274 Pre-XDR-TB lineage2.2.1 in
SRR9224963 MDR-TB lineage4.3.4.2 None
ERR5865945 Pre-XDR-TB lineage2.2.1 None
SRR22424822 Pre-XDR-TB lineage2.2.1 None
ERR3148215 Pre-XDR-TB lineage4.1.1.3 mx
ERR2707015 MDR-TB lineage5.2 cd
ERR2307655 Pre-XDR-TB lineage2.2.1 None
SRR5818635 MDR-TB lineage1.1.2 dj
SRR21277272 MDR-TB lineage2.2.2 None
SRR6797474 MDR-TB lineage1.1.3.1 None
ERR7911321 MDR-TB lineage2.2.1 vn
SRR25389484 Pre-XDR-TB lineage2.2.1 None
ERR4799443 Pre-XDR-TB lineage1.1.2 in
ERR5865728 MDR-TB lineage2.2.1 None
SRR18714978 MDR-TB lineage4.6.2.2 None
SRR25827298 XDR-TB lineage2.2.1 None
ERR11043475 MDR-TB lineage4.1.3 None
SRR10303330 Pre-XDR-TB lineage2.2.1 None
SRR6832593 MDR-TB lineage4.1.2.1 None
ERR8665724 Pre-XDR-TB lineage4.3.3 None
SRR25389482 Pre-XDR-TB lineage2.2.1 None
ERR1035326 Pre-XDR-TB lineage4.7 br
ERR3287358 Pre-XDR-TB lineage4.3.4.2 pe
SRR671807 Pre-XDR-TB lineage2.2.1 cn
ERR4799178 MDR-TB lineage4.8 in
SRR6797552 Other lineage1.1.3.1 None
ERR4810924 MDR-TB lineage2.2.1 cn
SRR26331614 Pre-XDR-TB lineage4.3.2.1 None
SRR28046348 Pre-XDR-TB lineage4.1.1.3 None
SRR28044958 Pre-XDR-TB lineage3 None
SRR11033729 MDR-TB lineage2.2.1 None
ERR9119486 MDR-TB lineage4.8 None
SRR3544724 Pre-XDR-TB lineage2.2.1 None
ERR4822550 MDR-TB lineage2.2.1 None
SRR3105758 MDR-TB lineage3 None