Rv3596c - c.1368A>C


Drug resistance types
40 Sensitive 3 RR-TB 14 HR-TB 11 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 24 Other
lineage Counts
lineage Count
lineage4.9 32
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 5
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.8 17
lineage4.2.1.1 1
La1.8.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage4.6.2.2 2
lineage1.1.3.1 1
lineage4.6.4;lineage4.9 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage2;lineage4.9 1
lineage4.9.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage4.1.2.1;lineage4.8 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.4.1.1.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.2.1;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 1
lineage4.1.1.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
1
spoligotype Counts
spoligotype Count
None 94
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180391 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR8975593 Sensitive lineage2.2.1 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR28389830 Sensitive lineage4.8 None
SRR6832178 HR-TB lineage4.2.1.1 None
SRR21595949 Other lineage4.8 None
SRR3675446 RR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR1180420 Sensitive lineage4.9 None
ERR3797019 Other La1.8.1 None
SRR29097019 Sensitive lineage4.8 None
ERR3797043 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR26112475 HR-TB lineage4.8 None
ERR1034634 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR29893822 Other lineage4.8 None
ERR3283018 HR-TB lineage4.9 None
SRR1183145 Other lineage2.2.1 None
SRR1180355 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR245758 Other lineage4.9.1 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR3797015 HR-TB lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
ERR13110331 Sensitive lineage4.8 None
ERR4821655 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR29096179 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR29342480 Sensitive lineage4.8 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1180270 Other lineage2.2.1 None
SRR22248475 Sensitive lineage4.1.2.1;lineage4.8 None
SRR28381185 Other lineage4.8 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
SRR1180312 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR28357667 Sensitive lineage4.8 None
SRR1180406 Sensitive lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180300 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
SRR6930935 Pre-XDR-TB lineage4.8 None
SRR28381182 Other lineage4.8 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1181283 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR29096740 Sensitive lineage4.8 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR21595941 Other lineage4.8 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR10040301 MDR-TB lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1180410 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR4796577 HR-TB None
SRR30146977 Other lineage4.8 None
ERR13259989 MDR-TB lineage4.8 None
SRR10808668 Sensitive lineage2.2.1 None