Rv0668 - c.3666G>C
Drug resistance types
10 Sensitive
0 RR-TB
20 HR-TB
6 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
21 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 12 |
| lineage3 | 3 |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage6.3 | 2 |
| 1 | |
| La1.2.BCG | 1 |
| lineage4.3.3 | 1 |
| lineage1.2.2.2 | 2 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1 | 11 |
| lineage4.6.1.1 | 3 |
| lineage4.3.2.1 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2 | 2 |
| La1.2 | 1 |
| La1;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046133 | HR-TB | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR12708419 | Other | lineage4.3.3 | None | ERR11252548 | Other | lineage1.2.2.2 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR11465665 | Other | lineage4.1.1.3 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR11465597 | Sensitive | lineage4.1.2.1 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR11489020 | MDR-TB | lineage2.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None |
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