EBG00000313339 - n.1998T>C


Drug resistance types
15 Sensitive 1 RR-TB 14 HR-TB 2 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 14 Other
lineage Counts
lineage Count
lineage4.9 9
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;M.canetti 8
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.2.BCG 1
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.2.1 4
lineage4.8 2
La1.6;La3;lineage4.9 2
lineage1.1.2 2
lineage1.2.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage1.1.1 1
lineage4.1.2.1 1
M.canetti;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage4.1.2.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage4.1.1.3 1
spoligotype Counts
spoligotype Count
None 47
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1173515 Sensitive lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR3283021 HR-TB lineage4.9 None
ERR1336820 Sensitive La3;M.canetti None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1043164 Other La3;M.canetti None
ERR4798262 HR-TB La1.2.BCG None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR22424765 HR-TB lineage4.8 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR1336824 Sensitive La3;M.canetti None
SRR21733183 RR-TB lineage1.1.2 None
ERR736820 MDR-TB lineage1.2.2.2 None
SRR1184308 Sensitive lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1196545 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR2100403 Other lineage1.1.2 None
ERR4820484 Sensitive lineage4.8 None
ERR1336821 Sensitive La3;M.canetti None
ERR1336826 Sensitive La3;M.canetti None
ERR3283018 HR-TB lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR1336825 Sensitive La3;M.canetti None
ERR4821811 Sensitive lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR1043163 Other La3;M.canetti None
ERR1336823 Sensitive La3;M.canetti None
SRR1140724 Other lineage2.2.1 None
ERR3283042 Other lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None