TB-Profiler
Home
Upload
SRA data
EBG00000313339
- n.1998T>C
Drug resistance types
15 Sensitive
1 RR-TB
14 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
9
La3;M.canetti
8
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9
4
lineage2.2.1
4
lineage4.8
2
La1.6;La3;lineage4.9
2
lineage1.1.2
2
lineage2.2.1;lineage4.1.2.1
1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9
1
lineage1.1.1
1
Showing 1 to 10 of 23 entries
Previous
1
2
3
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
47
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1043163
Other
La3;M.canetti
None
ERR1043164
Other
La3;M.canetti
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR11488822
Pre-XDR-TB
lineage2.2.1;lineage4.1.2.1
None
ERR1336820
Sensitive
La3;M.canetti
None
ERR1336821
Sensitive
La3;M.canetti
None
ERR1336823
Sensitive
La3;M.canetti
None
ERR1336824
Sensitive
La3;M.canetti
None
ERR1336825
Sensitive
La3;M.canetti
None
ERR1336826
Sensitive
La3;M.canetti
None
Showing 1 to 10 of 47 entries
Previous
1
2
3
4
5
Next