EBG00000313339 - n.1998T>C
Drug resistance types
6 Sensitive
2 RR-TB
17 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| 16 | |
| lineage4.1.2.1 | 1 |
| lineage4.8 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9 | 7 |
| lineage4.3.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 3 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| La1.3 | 1 |
| La1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 4 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 41 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675234 | Other | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR2693230 | Other | None | SRR2100403 | Other | lineage1.1.2 | None | ERR2693231 | Other | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6046260 | Sensitive | lineage4.3.1.1 | None | SRR6045233 | HR-TB | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6046644 | HR-TB | None | ERR3283024 | Other | None | SRR6982246 | Sensitive | lineage4 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3797014 | Other | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797017 | Other | None | ERR4769516 | Other | La1.3 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR736835 | HR-TB | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR22424765 | MDR-TB | lineage4 | None |
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