Rv3596c - c.1023C>T
Drug resistance types
4 Sensitive
3 RR-TB
6 HR-TB
2 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 4 |
| lineage4.9 | 8 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.4.2 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 22 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR369151 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR26159043 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR11464970 | Sensitive | lineage4.3.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR25827682 | Other | None | SRR1140724 | Other | lineage2.2.1 | None |
|---|
