EBG00000313339 - n.2104C>T
Drug resistance types
8 Sensitive
3 RR-TB
6 HR-TB
6 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 1 |
| lineage3 | 3 |
| lineage4.1.2.1 | 7 |
| lineage4.1.3 | 1 |
| lineage4.8 | 4 |
| lineage2.2.1 | 9 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.9 | 4 |
| lineage4.6.2.2 | 1 |
| lineage4 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 4 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR13180204 | Sensitive | lineage3 | None | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR13180362 | Sensitive | lineage4.1.2.1 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | SRR15276982 | Pre-XDR-TB | lineage3 | None | SRR19304029 | Other | lineage4.8 | None | SRR18002956 | HR-TB | lineage2.2.1 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4815472 | Other | lineage4.9 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4820324 | Other | lineage4 | None | ERR4820284 | Other | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2514174 | Other | lineage4.2.2.2 | gb | ERR4820369 | Other | lineage2.2.1 | None | ERR2514645 | Other | lineage4.3.4.1 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR2515007 | Other | lineage3 | None | ERR2514668 | Other | lineage4.8.1 | gb | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4821332 | Other | lineage4.1.2.1 | gb | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6257024 | Pre-XDR-TB | lineage2.2.1 | None | SRR6855695 | Sensitive | lineage4.8 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4829470 | Sensitive | lineage4.8 | it | SRR7131237 | Other | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769408 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769406 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None |
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