EBG00000313339 - n.859C>T
Drug resistance types
12 Sensitive
14 RR-TB
8 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 19 |
| lineage4.9.1 | 1 |
| lineage4 | 4 |
| lineage4.1.1.3 | 2 |
| lineage2.2.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.1.2 | 2 |
| lineage4.9 | 7 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage3 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.3 | 2 |
| lineage6 | 1 |
| lineage2.2.1 | 10 |
| La1.8.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.3.2 | 2 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 67 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2228965 | Other | lineage4.8 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229810 | Other | lineage4.8 | None | ERR212082 | Sensitive | lineage4.9.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229801 | Other | lineage4 | None | ERR2229436 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228890 | Other | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2229804 | Other | lineage4 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR2100877 | HR-TB | lineage4.1.2 | None | ERR4819724 | Other | lineage4.9 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR7131013 | Sensitive | lineage4.1.2.1 | None | SRR6964650 | Sensitive | lineage3 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7131190 | Sensitive | lineage6 | None | ERR019855 | Other | lineage3 | None | SRR7517748 | HR-TB | lineage4.4.1.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR017781 | Other | lineage3 | None | ERR3439372 | Other | La1.8.1 | None | ERR11043956 | Sensitive | lineage3.1.3 | None | ERR5863990 | Pre-XDR-TB | lineage2.2.1 | None | ERR4024972 | Sensitive | lineage4.3.2 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR5863736 | MDR-TB | lineage2.2.1 | None | ERR5864324 | MDR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | ERR5865953 | MDR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR6865393 | Sensitive | lineage4.3.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1173833 | Other | lineage4.9 | None | SRR18572455 | Sensitive | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None |
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