EBG00000313325 - n.1313T>C


Drug resistance types
120 Sensitive 1 RR-TB 3 HR-TB 0 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 351 Other
lineage Counts
lineage Count
lineage4.9 467
lineage2.2.1 4
lineage4.3.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage6.3.1 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 475
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180026 Sensitive lineage4.9 None
SRR1180209 Other lineage4.9 None
SRR1183682 Other lineage4.9 None
SRR1180503 Other lineage4.9 None
SRR1180774 Other lineage4.9 None
SRR1183360 Other lineage4.9 None
SRR1180815 Other lineage4.9 None
SRR1180530 Other lineage4.9 None
SRR1183601 Other lineage4.9 None
SRR1183373 Other lineage4.9 None
SRR1182929 Other lineage4.9 None
SRR1182960 Sensitive lineage4.9 None
SRR1180631 Other lineage4.9 None
SRR1180518 Other lineage4.9 None
SRR1180486 Other lineage4.9 None
SRR1180524 Other lineage4.9 None
SRR1183358 Other lineage4.9 None
SRR1180624 Other lineage4.9 None
SRR1183369 Other lineage4.9 None
SRR1180021 Sensitive lineage4.9 None
SRR1183185 Other lineage4.9 None
SRR1183096 Sensitive lineage4.9 None
SRR1181495 Sensitive lineage4.9 None
SRR1180494 Sensitive lineage4.9 None
SRR12006091 Sensitive lineage4.9 None
SRR1181176 Other lineage4.9 None
SRR1180119 Other lineage4.9 None
SRR1183279 Sensitive lineage4.9 None
SRR1183076 Other lineage4.9 None
SRR1181589 Other lineage4.9 None
SRR1181490 Other lineage4.9 None
SRR1182882 Other lineage4.9 None
SRR1180830 Other lineage4.9 None
SRR1180222 Other lineage4.9 None
SRR1180617 Other lineage4.9 None
SRR1183075 Sensitive lineage4.9 None
SRR1181593 Other lineage4.9 None
SRR1180240 Other lineage4.9 None
SRR1183502 Other lineage4.9 None
SRR1208721 Other lineage4.9 None
SRR1182958 Other lineage4.9 None
SRR1181199 Other lineage4.9 None
SRR1180114 Other lineage4.9 None
SRR1180241 Other lineage4.9 None
SRR1183305 Other lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR1182925 Other lineage4.9 None
SRR1180131 Sensitive lineage4.9 None
ERR3283043 Other lineage4.9 None
SRR1183688 Sensitive lineage4.9 None
SRR1183606 Sensitive lineage4.9 None
SRR1183617 Other lineage4.9 None
SRR1181542 Other lineage4.9 None
SRR1202384 Other lineage4.9 None
SRR1180174 Other lineage4.9 None
SRR1183192 Other lineage4.9 None
SRR1183678 Other lineage4.9 None
SRR1182992 Other lineage4.9 None
SRR1183677 Sensitive lineage4.9 None
SRR1181591 Sensitive lineage4.9 None
SRR1181223 Other lineage4.9 None
SRR1182920 Other lineage4.9 None
SRR1208196 Sensitive lineage4.9 None
SRR1183418 Other lineage4.9 None
SRR6785282 Other lineage4.3.3 None
SRR1181267 Other lineage4.9 None
SRR1183031 Other lineage4.9 None
SRR1181509 Other lineage4.9 None
SRR1183388 Other lineage4.9 None
SRR1180612 Other lineage4.9 None
SRR1183214 Other lineage4.9 None
SRR1181488 Sensitive lineage4.9 None
SRR1181392 Other lineage4.9 None
SRR1180111 Other lineage4.9 None
SRR1181272 Sensitive lineage4.9 None
SRR1183020 Other lineage4.9 None
SRR1180025 Other lineage4.9 None
SRR1183019 Other lineage4.9 None
SRR1182880 Other lineage4.9 None
SRR1183188 Other lineage4.9 None
SRR1202406 Sensitive lineage4.9 None
SRR1183132 Other lineage4.9 None
SRR1183456 Other lineage4.9 None
SRR1180115 Other lineage4.9 None
SRR1180041 Sensitive lineage4.9 None
SRR1181144 Sensitive lineage4.9 None
SRR1183328 Sensitive lineage4.9 None
SRR1183414 Other lineage4.9 None
SRR1183549 Other lineage4.9 None
SRR1180197 Other lineage4.9 None
SRR1183402 Other lineage4.9 None
SRR1182966 Sensitive lineage4.9 None
SRR1183716 Other lineage4.9 None
SRR1183197 Other lineage4.9 None
SRR1208682 Other lineage4.9 None
SRR1180751 Other lineage4.9 None
SRR1183322 Other lineage4.9 None
SRR1182951 Other lineage4.9 None
SRR1180623 Sensitive lineage4.9 None
SRR1183223 Sensitive lineage4.9 None
SRR1183050 Other lineage4.9 None
SRR1183614 Sensitive lineage4.9 None
SRR1183149 Other lineage4.9 None
SRR1180213 Other lineage4.9 None
SRR1180745 Other lineage4.9 None
SRR1181299 Other lineage4.9 None
SRR1183359 Other lineage4.9 None
SRR1183202 Sensitive lineage4.9 None
SRR1180647 Other lineage4.9 None
SRR1183335 Other lineage4.9 None
SRR1180094 Other lineage4.9 None
SRR1182976 Other lineage4.9 None
SRR1180559 Other lineage4.9 None
ERR3283051 Other lineage4.9 None
SRR1181200 Sensitive lineage4.9 None
SRR1181516 Other lineage4.9 None
SRR1183511 Other lineage4.9 None
SRR1183698 Other lineage4.9 None
SRR1182885 Other lineage4.9 None
SRR1181184 Sensitive lineage4.9 None
SRR1183495 Other lineage4.9 None
SRR1180031 Other lineage4.9 None
SRR1183531 Other lineage4.9 None
SRR1181360 Sensitive lineage4.9 None
SRR1182901 Other lineage4.9 None
SRR1180062 Other lineage4.9 None
SRR1209015 Sensitive lineage4.9 None
SRR1180594 Sensitive lineage4.9 None
SRR1183121 Other lineage4.9 None
SRR1180047 Other lineage4.9 None
SRR1180569 Sensitive lineage4.9 None
SRR1180074 Sensitive lineage4.9 None
SRR1183093 Other lineage4.9 None
SRR1183439 Other lineage4.9 None
SRR1181573 Other lineage4.9 None
SRR1180087 Other lineage4.9 None
SRR1181228 Sensitive lineage4.9 None
SRR1181277 Other lineage4.9 None
SRR1183281 Other lineage4.9 None
SRR1183520 Other lineage4.9 None
SRR1181229 Other lineage4.9 None
SRR1180724 Other lineage4.9 None
SRR1181577 Other lineage4.9 None
SRR1181359 Sensitive lineage4.9 None
SRR1181226 Other lineage4.9 None
SRR1183385 Other lineage4.9 None
SRR1181496 Other lineage4.9 None
SRR1183669 Other lineage4.9 None
SRR1180081 Other lineage4.9 None
SRR1181358 Other lineage4.9 None
SRR1182927 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1180020 Other lineage4.9 None
SRR1180731 Other lineage4.9 None
SRR1183479 Other lineage4.9 None
SRR1183472 Other lineage4.9 None
SRR12006095 Sensitive lineage4.9 None
SRR1183674 Other lineage4.9 None
SRR1180239 Other lineage4.9 None
SRR1183168 Other lineage4.9 None
SRR1181231 Other lineage4.9 None
SRR1183181 Sensitive lineage4.9 None
SRR1183600 Sensitive lineage4.9 None
SRR1183717 Other lineage4.9 None
SRR1180738 Other lineage4.9 None
SRR1183255 Other lineage4.9 None
SRR1183438 Other lineage4.9 None
SRR1182912 Other lineage4.9 None
SRR12006068 Sensitive lineage4.9 None
SRR1183483 Sensitive lineage4.9 None
SRR1183476 Sensitive lineage4.9 None
SRR1180052 Other lineage4.9 None
SRR1183375 Other lineage4.9 None
SRR1208277 Other lineage4.9 None
SRR1208892 Sensitive lineage4.9 None
SRR1183499 Other lineage4.9 None
SRR1183687 Other lineage4.9 None
SRR1183297 Other lineage4.9 None
SRR1181224 Other lineage4.9 None
SRR1182904 Sensitive lineage4.9 None
SRR1183665 Other lineage4.9 None
SRR1180018 Sensitive lineage4.9 None
SRR1183113 Sensitive lineage4.9 None
SRR1183304 Other lineage4.9 None
SRR1180126 Sensitive lineage4.9 None
SRR1180144 Sensitive lineage4.9 None
SRR1183684 Other lineage4.9 None
SRR1183603 Other lineage4.9 None
SRR1182954 Other lineage4.9 None
SRR1183282 Other lineage4.9 None
SRR1183173 Sensitive lineage4.9 None
SRR1180729 Sensitive lineage4.9 None
SRR1180613 Other lineage4.9 None
SRR1183316 Sensitive lineage4.9 None
SRR1202706 Other lineage4.9 None
SRR1183664 Other lineage4.9 None
SRR1181232 Sensitive lineage4.9 None
SRR1202714 Sensitive lineage4.9 None
SRR1183190 Other lineage4.9 None
SRR1183364 Other lineage4.9 None
SRR1183453 Other lineage4.9 None
SRR1183523 Other lineage4.9 None
SRR1183720 Other lineage4.9 None
SRR1182874 Sensitive lineage4.9 None
SRR1183500 Other lineage4.9 None
SRR1180113 Other lineage4.9 None
SRR1183718 Sensitive lineage4.9 None
SRR1183621 Other lineage4.9 None
SRR1180686 Other lineage4.9 None
SRR1183175 Other lineage4.9 None
SRR1181499 Other lineage4.9 None
SRR1183327 Other lineage4.9 None
SRR1180657 Other lineage4.9 None
SRR1183306 Other lineage4.9 None
SRR1183451 Sensitive lineage4.9 None
SRR1180046 Other lineage4.9 None
SRR1180091 Other lineage4.9 None
SRR1183482 Other lineage4.9 None
SRR1183421 Sensitive lineage4.9 None
SRR1183213 Other lineage4.9 None
SRR1183287 Other lineage4.9 None
SRR1183067 Other lineage4.9 None
SRR1183712 Other lineage4.9 None
SRR1183137 Other lineage4.9 None
SRR1180214 Sensitive lineage4.9 None
SRR1183323 Other lineage4.9 None
SRR1180083 Sensitive lineage4.9 None
SRR1180138 Sensitive lineage4.9 None
SRR1182878 Other lineage4.9 None
SRR1181264 Sensitive lineage4.9 None
SRR1181286 Other lineage4.9 None
SRR1180743 Other lineage4.9 None
SRR1182919 Sensitive lineage4.9 None
ERR4818440 Other lineage6.3.1 None
SRR1183307 Other lineage4.9 None
SRR1183238 Other lineage4.9 None
SRR1183419 Sensitive lineage4.9 None
SRR1183708 Other lineage4.9 None
SRR1180807 Sensitive lineage4.9 None
SRR1182908 Other lineage4.9 None
SRR12006056 Sensitive lineage4.9 None
SRR1183704 Other lineage4.9 None
SRR1182990 Other lineage4.9 None
SRR1182889 Other lineage4.9 None
SRR1183224 Other lineage4.9 None
SRR1183694 Sensitive lineage4.9 None
SRR1183602 Other lineage4.9 None
SRR1181281 Other lineage4.9 None
SRR1182953 Other lineage4.9 None
SRR1183403 Other lineage4.9 None
SRR1183430 Other lineage4.9 None
SRR1180666 Other lineage4.9 None
SRR1180578 Other lineage4.9 None
SRR1183548 Other lineage4.9 None
SRR1182893 Other lineage4.9 None
SRR1183268 Other lineage4.9 None
SRR1183239 Other lineage4.9 None
SRR1183668 Sensitive lineage4.9 None
SRR1181569 Other lineage4.9 None
SRR1180019 Other lineage4.9 None
SRR1182977 Sensitive lineage4.9 None
SRR1180803 Other lineage4.9 None
SRR1180459 Other lineage4.9 None
SRR1183461 Other lineage4.9 None
SRR1180750 Other lineage4.9 None
SRR1182903 Sensitive lineage4.9 None
SRR1180661 Sensitive lineage4.9 None
SRR1183057 Other lineage4.9 None
SRR12006082 Sensitive lineage4.9 None
SRR1180765 Sensitive lineage4.9 None
SRR1183318 Sensitive lineage4.9 None
SRR1183680 Other lineage4.9 None
SRR1183341 Other lineage4.9 None
SRR1183086 Other lineage4.9 None
SRR1183015 Other lineage4.9 None
SRR1183290 Other lineage4.9 None
SRR1182965 Other lineage4.9 None
SRR1181422 Other lineage4.9 None
SRR1181147 Other lineage4.9 None
SRR1180196 Other lineage4.9 None
SRR1183091 Other lineage4.9 None
SRR1180520 Other lineage4.9 None
SRR1180796 Sensitive lineage4.9 None
SRR1180153 Other lineage4.9 None
SRR1182982 Other lineage4.9 None
SRR1183210 Sensitive lineage4.9 None
SRR1183400 Sensitive lineage4.9 None
SRR1181582 Other lineage4.9 None
SRR1183377 Sensitive lineage4.9 None
SRR1180687 Other lineage4.9 None
SRR1209038 Sensitive lineage4.9 None
SRR1183164 Other lineage4.9 None
SRR1183412 Other lineage4.9 None
SRR1208476 Other lineage4.9 None
SRR1183277 Other lineage4.9 None
SRR1183244 Other lineage4.9 None
SRR1180782 Other lineage4.9 None
SRR12006070 Sensitive lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1181580 Other lineage4.9 None
SRR1181386 Other lineage4.9 None
SRR1183333 Other lineage4.9 None
SRR1180048 Other lineage4.9 None
SRR1180831 Other lineage4.9 None
SRR1181244 Other lineage4.9 None
SRR1180066 Sensitive lineage4.9 None
SRR1183170 Other lineage4.9 None
SRR1183285 Other lineage4.9 None
SRR1180154 Other lineage4.9 None
SRR1208891 Other lineage4.9 None
SRR1180667 Other lineage4.9 None
SRR1183529 Other lineage4.9 None
SRR1181575 Other lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1183225 Other lineage4.9 None
SRR1180579 Other lineage4.9 None
SRR1183692 Sensitive lineage4.9 None
SRR1183435 Other lineage4.9 None
SRR1180228 Other lineage4.9 None
SRR1183153 Other lineage4.9 None
SRR1180714 Sensitive lineage4.9 None
SRR1183538 Other lineage4.9 None
SRR1183187 Sensitive lineage4.9 None
SRR1183237 Other lineage4.9 None
SRR1183383 Other lineage4.9 None
SRR1183321 Other lineage4.9 None
SRR1180752 Other lineage4.9 None
SRR1181398 Other lineage4.9 None
SRR1183200 Sensitive lineage4.9 None
SRR1181194 Sensitive lineage4.9 None
SRR1183437 Other lineage4.9 None
SRR1181428 Other lineage4.9 None
SRR1180597 Other lineage4.9 None
SRR1183195 Sensitive lineage4.9 None
SRR1183362 Other lineage4.9 None
SRR1183672 Sensitive lineage4.9 None
SRR12006090 Sensitive lineage4.9 None
SRR1183069 Other lineage4.9 None
SRR1183016 Sensitive lineage4.9 None
SRR1180543 Sensitive lineage4.9 None
SRR1180128 Other lineage4.9 None
SRR1181236 Other lineage4.9 None
SRR1183410 Other lineage4.9 None
SRR1183309 Other lineage4.9 None
SRR1180118 Sensitive lineage4.9 None
SRR1180787 Other lineage4.9 None
SRR1183334 Other lineage4.9 None
SRR1183302 Other lineage4.9 None
SRR1180017 Other lineage4.9 None
SRR1182896 Other lineage4.9 None
SRR1183226 Other lineage4.9 None
SRR1183613 Other lineage4.9 None
SRR1183227 Other lineage4.9 None
SRR1180735 Other lineage4.9 None
SRR1183061 Other lineage4.9 None
SRR1183702 Other lineage4.9 None
SRR1180580 Other lineage4.9 None
SRR1183068 Other lineage4.9 None
SRR1183122 Other lineage4.9 None
SRR1183023 Sensitive lineage4.9 None
SRR1181287 Sensitive lineage4.9 None
SRR1180764 Sensitive lineage4.9 None
SRR1183417 Sensitive lineage4.9 None
SRR1180610 Sensitive lineage4.9 None
SRR1180235 Other lineage4.9 None
SRR1182883 Other lineage4.9 None
SRR1183259 Sensitive lineage4.9 None
SRR1182888 Sensitive lineage4.9 None
SRR1183097 Other lineage4.9 None
SRR1182963 Sensitive lineage4.9 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1180717 Other lineage4.9 None
SRR1202702 Other lineage4.9 None
SRR1180482 Other lineage4.9 None
SRR1180723 Other lineage4.9 None
SRR1183710 Other lineage4.9 None
SRR1183422 Other lineage4.9 None
SRR1183109 Other lineage4.9 None
SRR1181291 Sensitive lineage4.9 None
SRR1181268 Other lineage4.9 None
SRR1180737 Other lineage4.9 None
SRR1183404 Other lineage4.9 None
SRR1182900 Sensitive lineage4.9 None
SRR1181595 Other lineage4.9 None
SRR1183315 Other lineage4.9 None
SRR1180204 Other lineage4.9 None
SRR1180080 Other lineage4.9 None
SRR1183018 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR1180643 Other lineage4.9 None
SRR1208526 Sensitive lineage4.9 None
SRR1181191 Other lineage4.9 None
SRR1183180 Other lineage4.9 None
SRR1183349 Other lineage4.9 None
SRR1180061 Other lineage4.9 None
SRR1183442 Other lineage4.9 None
SRR1180705 Other lineage4.9 None
SRR1208756 Other lineage4.9 None
SRR1182911 Sensitive lineage4.9 None
SRR1183449 Sensitive lineage4.9 None
SRR1182876 Other lineage4.9 None
SRR1183394 Other lineage4.9 None
SRR1181574 Sensitive lineage4.9 None
SRR1181377 Other lineage4.9 None
SRR1180192 Other lineage4.9 None
SRR1183543 Sensitive lineage4.9 None
SRR1180822 Other lineage4.9 None
SRR1183240 Other lineage4.9 None
SRR1180668 Other lineage4.9 None
SRR1183452 Other lineage4.9 None
SRR1181143 Other lineage4.9 None
SRR1183314 Other lineage4.9 None
SRR1180495 Other lineage4.9 None
SRR1180073 Other lineage4.9 None
SRR1183098 Other lineage4.9 None
SRR1180554 Sensitive lineage4.9 None
SRR1181372 Other lineage4.9 None
SRR1180702 Other lineage4.9 None
SRR1180588 Other lineage4.9 None
SRR1183325 Other lineage4.9 None
SRR1181587 Other lineage4.9 None
SRR1180829 Other lineage4.9 None
SRR1183270 Other lineage4.9 None
SRR1208281 Sensitive lineage4.9 None
SRR1181233 Other lineage4.9 None
SRR1183126 Other lineage4.9 None
SRR1180024 Other lineage4.9 None
SRR1208759 Sensitive lineage4.9 None
SRR1183339 Other lineage4.9 None
SRR1181592 Other lineage4.9 None
SRR1180493 Sensitive lineage4.9 None
SRR1180813 Other lineage4.9 None
SRR1183681 Other lineage4.9 None
SRR1180105 Other lineage4.9 None
SRR1183686 Sensitive lineage4.9 None
SRR1183517 Other lineage4.9 None
SRR1181397 Sensitive lineage4.9 None
SRR1180095 Other lineage4.9 None
SRR1182921 Other lineage4.9 None
SRR1183207 Sensitive lineage4.9 None
SRR1180456 Other lineage4.9 None
SRR1183128 Other lineage4.9 None
SRR1183619 Other lineage4.9 None
SRR1202713 Sensitive lineage4.9 None
SRR1183152 Other lineage4.9 None
SRR1181221 Other lineage4.9 None
SRR1183288 Other lineage4.9 None
SRR1181269 Other lineage4.9 None
SRR1180834 Other lineage4.9 None
SRR1183138 Other lineage4.9 None
SRR1180692 Sensitive lineage4.9 None
SRR1183610 Other lineage4.9 None
SRR1180758 Sensitive lineage4.9 None
SRR1180525 Other lineage4.9 None
SRR1180466 Sensitive lineage4.9 None
SRR1183524 Other lineage4.9 None
SRR1181275 Sensitive lineage4.9 None
SRR1208536 Other lineage4.9 None
SRR1180164 Other lineage4.9 None
SRR1180669 Other lineage4.9 None
SRR1181303 Other lineage4.9 None
SRR1183604 Sensitive lineage4.9 None
SRR1183707 Other lineage4.9 None
SRR1180125 Other lineage4.9 None
SRR1183354 Other lineage4.9 None
SRR1180672 Other lineage4.9 None
SRR1180158 Other lineage4.9 None
SRR1181193 Other lineage4.9 None
SRR1183458 Sensitive lineage4.9 None
SRR1183432 Other lineage4.9 None
SRR1180106 Other lineage4.9 None
ERR3283008 Other lineage4.9 None
SRR1183212 Other lineage4.9 None
SRR1208539 Sensitive lineage4.9 None
SRR1182923 Other lineage4.9 None