Rv3596c - c.975C>G
Drug resistance types
58 Sensitive
22 RR-TB
14 HR-TB
17 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| 6 | |
| lineage2.2.1 | 20 |
| lineage4.9 | 15 |
| lineage4.4 | 1 |
| La1.4 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 59 |
| lineage4 | 13 |
| lineage4.1.1.3 | 2 |
| lineage3 | 3 |
| lineage4.1.2.1 | 1 |
| lineage3.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.7 | 1 |
| lineage2.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage2 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 146 |
Geographic prevalence
Country level data for this variant is available for 16 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16156832 | RR-TB | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16278274 | Other | La1.4 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR2101432 | Sensitive | lineage4.1.1.3 | None | ERR4815310 | Other | None | ERR4814345 | Sensitive | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | ERR2229536 | Sensitive | lineage4.8 | None | ERR2229539 | Sensitive | lineage4.8 | None | ERR2229545 | Sensitive | lineage4.8 | None | ERR4816982 | Other | lineage4 | None | ERR1949956 | Sensitive | lineage4.8 | None | ERR2229040 | Sensitive | lineage4 | None | ERR2229555 | HR-TB | lineage4.8 | None | ERR2229082 | Sensitive | lineage4.8 | None | ERR2229558 | Sensitive | lineage4.8 | dk | ERR1950061 | Sensitive | lineage4.8 | None | ERR2229566 | RR-TB | lineage4.8 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR2229572 | Sensitive | lineage4.8 | None | ERR2229578 | Sensitive | lineage4 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2229096 | Sensitive | lineage4 | None | ERR2229092 | Other | lineage4.8 | None | ERR2229104 | Sensitive | lineage4.8 | None | ERR2229152 | Sensitive | lineage4.8 | None | ERR2229107 | Sensitive | lineage4 | None | ERR2229584 | Other | lineage4.8 | None | ERR2229587 | Sensitive | lineage4.8 | None | ERR2229764 | HR-TB | lineage4.8 | None | ERR4817069 | RR-TB | None | ERR2229607 | HR-TB | lineage4.8 | None | ERR2229620 | Sensitive | lineage4.8 | None | ERR2229112 | Sensitive | lineage4.8 | dk | ERR2229166 | Sensitive | lineage4 | None | ERR2229169 | HR-TB | lineage4.8 | None | ERR2229176 | Sensitive | lineage4 | None | ERR2229600 | Sensitive | lineage4.8 | None | ERR2229199 | Sensitive | lineage4.8 | None | ERR2229203 | Sensitive | lineage4.8 | dk | ERR2229216 | Sensitive | lineage4.8 | dk | ERR2229618 | Sensitive | lineage4.8 | dk | ERR2229305 | Sensitive | lineage4.8 | None | ERR2229291 | Sensitive | lineage4.8 | None | ERR2229296 | Sensitive | lineage4.8 | None | ERR2229298 | Sensitive | lineage4.8 | None | ERR2229345 | Sensitive | lineage4.8 | dk | ERR2229322 | Sensitive | lineage4.8 | None | ERR2229315 | Sensitive | lineage4 | None | ERR2229324 | Other | lineage4.8 | None | ERR2229325 | Other | lineage4.8 | dk | ERR2229342 | Sensitive | lineage4.8 | dk | ERR2229659 | Sensitive | lineage4.8 | None | ERR2229363 | Sensitive | lineage4.8 | None | ERR2229360 | Other | lineage4.8 | None | ERR2229374 | Sensitive | lineage4.8 | None | ERR2229379 | HR-TB | lineage4.8 | None | ERR2229376 | Other | lineage4.8 | None | ERR2229370 | Sensitive | lineage4.8 | None | ERR2229372 | Sensitive | lineage4.8 | dk | ERR2229384 | Sensitive | lineage4.8 | None | ERR2229391 | Other | lineage4.8 | None | ERR2229387 | Sensitive | lineage4.8 | None | ERR2229411 | Sensitive | lineage4 | None | ERR2229402 | Sensitive | lineage4.8 | None | ERR2229444 | Sensitive | lineage4.8 | None | ERR2229430 | Sensitive | lineage4.8 | dk | ERR2229462 | Other | lineage4.8 | None | ERR2229495 | Sensitive | lineage4.8 | dk | ERR2229473 | Sensitive | lineage4.8 | None | ERR2228828 | Other | lineage4.8 | None | ERR2229718 | Sensitive | lineage4.8 | None | ERR2245360 | Sensitive | lineage3.1.1 | None | ERR2229511 | Sensitive | lineage4.8 | None | ERR2229724 | Other | lineage4 | None | ERR2228868 | Sensitive | lineage4.8 | None | ERR2245332 | HR-TB | lineage3.1.1 | no | ERR2229528 | Sensitive | lineage4.8 | None | ERR2510682 | Pre-XDR-TB | lineage2.2.1 | it | ERR4821143 | RR-TB | lineage4.9 | None | ERR2503474 | Sensitive | lineage4.2.1.1 | None | ERR2514771 | RR-TB | lineage4.8.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR2179838 | Sensitive | lineage4.5 | cn | ERR4821550 | Other | lineage2.2.1 | None | ERR4822127 | Sensitive | lineage4.8 | gb | ERR502470 | RR-TB | lineage4.9 | None | ERR4827442 | MDR-TB | lineage2.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR6896280 | Other | lineage4.1.1.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797046 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4811101 | Other | lineage4.4.2 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | ERR9892005 | HR-TB | lineage4.7 | None | ERR6336762 | Other | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR11972242 | Other | lineage2.2.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR11972164 | MDR-TB | lineage2.2.1.1 | None | SRR11972169 | HR-TB | lineage2.2 | None | SRR11972312 | MDR-TB | lineage2.2.1 | None | SRR11972452 | MDR-TB | lineage1.1.3.1 | None | SRR11972421 | MDR-TB | lineage2.2.1 | None | SRR11972333 | Sensitive | lineage1.1.2 | None | SRR11972413 | MDR-TB | lineage1.1.2 | None | SRR12199421 | Sensitive | lineage1.1.3.1 | None | SRR13068989 | RR-TB | lineage4.9;lineage2 | None | SRR13986568 | Other | La1.2 | None |
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