Rv0006 - c.1821C>A
Drug resistance types
3 Sensitive
1 RR-TB
7 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| 13 | |
| lineage2.1;lineage4.9 | 7 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4.9 | 8 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 5 |
| lineage4.8 | 1 |
| lineage6 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage1.1;lineage4.1.3 | 1 |
| lineage4.1.3 | 2 |
| lineage4.7 | 1 |
| lineage2.1 | 1 |
| lineage4.6.1 | 1 |
| lineage4.1 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 61 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12416824 | HR-TB | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675457 | Other | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4820335 | Other | lineage4.1.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811075 | Other | None | ERR9786569 | Other | lineage4.8 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR9787165 | Other | lineage6 | None | SRR7535086 | Other | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR9117709 | Other | None | SRR3675549 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR4816999 | Other | None | ERR4811105 | HR-TB | None | ERR4816100 | Sensitive | lineage1.1;lineage4.1.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4819932 | Sensitive | lineage4.7 | None | ERR4816585 | Other | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | SRR7496509 | Other | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR7496472 | Other | lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR9787197 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None |
|---|
