SAMN02231179
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2513998
|
HR-TB
|
lineage4.1.3
|
gb
|
SRR998732
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2514564
|
HR-TB
|
lineage4.1.3
|
gb
|
ERR2679245
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2679303
|
Sensitive
|
lineage4.1
|
None
|
ERR3324345
|
RR-TB
|
lineage4.1
|
None
|
ERR3276171
|
Sensitive
|
lineage4.1.3
|
nl
|
ERR9786616
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786482
|
Sensitive
|
lineage4.1
|
None
|
ERR2679314
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4814637
|
Other
|
lineage4.1.3
|
gb
|
ERR028357
|
HR-TB
|
lineage4.1.3
|
None
|
ERR028365
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998812
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998787
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680011
|
MDR-TB
|
lineage4.1
|
None
|
ERR10680191
|
MDR-TB
|
lineage4.1
|
None
|
SRR26112285
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13284011
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998704
|
Other
|
lineage4.1.3
|
None
|
SRR998822
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998847
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444241
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4818816
|
MDR-TB
|
lineage4.1.3
|
gb
|
SAMEA2533702
|
HR-TB
|
lineage4.1.3
|
None
|
SRR29126694
|
HR-TB
|
lineage4.1.3
|
None
|
SRR29126838
|
Sensitive
|
lineage4.1.3
|
None
|
SRR29126878
|
Sensitive
|
lineage4.1
|
None
|
SRR29055652
|
Sensitive
|
lineage4.1
|
None
|
ERR9786153
|
Sensitive
|
lineage4.1
|
None
|
ERR9786344
|
Sensitive
|
lineage4.1
|
None
|
ERR9786127
|
Sensitive
|
lineage4.1
|
None
|
SRR21727727
|
Other
|
lineage4.1.3
|
None
|
SRR7517789
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998685
|
Other
|
lineage4.1.3
|
None
|
SRR998700
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998736
|
Sensitive
|
lineage4.1.3
|
None
|
ERR13284711
|
MDR-TB
|
lineage4.1
|
None
|
ERR13284972
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR553347
|
Sensitive
|
lineage4.1
|
None
|
SRR1049976
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR998774
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998734
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998803
|
MDR-TB
|
lineage4.1.3;lineage5.1.1
|
None
|
ERR234201
|
HR-TB
|
lineage4.1.3
|
gh
|
ERR4423599
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4831163
|
Sensitive
|
lineage4.1
|
de
|
SAMN02231146
|
Sensitive
|
lineage4.1.3
|
ml
|
SAMN02231181
|
MDR-TB
|
lineage4.1.3
|
ml
|
SRR3724956
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517793
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR11067754
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR22248472
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3732646
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR550925
|
Sensitive
|
lineage4.1.3
|
de
|
ERR552431
|
MDR-TB
|
lineage4.1.3
|
cg
|
SRR998821
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786307
|
Sensitive
|
lineage4.1.1.1;lineage4.1.3
|
None
|
ERR9786400
|
Sensitive
|
lineage4.1
|
None
|
ERR3275879
|
Sensitive
|
lineage4.1.3
|
nl
|
ERR9786596
|
Sensitive
|
lineage2.2.1;lineage4.1
|
None
|
ERR9786626
|
Sensitive
|
lineage4.1
|
None
|
ERR9786707
|
Sensitive
|
lineage4.1
|
None
|
SRR026443
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4821263
|
Other
|
lineage4.1.3
|
gb
|
SRR1577821
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4828894
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4829403
|
Sensitive
|
lineage4.1
|
None
|
ERR2199985
|
Sensitive
|
lineage4.1.3
|
de
|
ERR2679262
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4816216
|
Sensitive
|
lineage1.1.2;lineage4.1
|
gb
|
SRR11443991
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1162472
|
HR-TB
|
lineage4.1
|
None
|
ERR9786806
|
Other
|
lineage4.1.3
|
None
|
SRR1103616
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2679263
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4811382
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4818165
|
Sensitive
|
lineage4.1.3
|
gb
|
ERR11044241
|
Sensitive
|
lineage4.1.3
|
None
|
ERR13289725
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8773495
|
Sensitive
|
lineage4.1
|
None
|
ERR9786457
|
Sensitive
|
lineage4.1
|
None
|
ERR9786938
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998670
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774081
|
Sensitive
|
lineage4.1
|
None
|
SRR998665
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4195357
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4423596
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1103486
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13270283
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2864270
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13292093
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3725714
|
MDR-TB
|
lineage4.1
|
None
|
SRR3725708
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998795
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1145851
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231154
|
Pre-XDR-TB
|
lineage4.1.3
|
ml
|
ERR2516850
|
MDR-TB
|
lineage4.1.3
|
gb
|
ERR9786310
|
Sensitive
|
lineage4.1
|
None
|
ERR9786647
|
Other
|
lineage4.1
|
None
|
SRR22249746
|
HR-TB
|
lineage1.1.1
|
None
|
SRR998770
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998749
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SAMN02231131
|
Sensitive
|
lineage4.1.3
|
ml
|
SRR29055974
|
Sensitive
|
lineage4.1
|
None
|
ERR11068224
|
Sensitive
|
lineage4.1
|
None
|
SRR1049975
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1049967
|
Sensitive
|
lineage4.1.3
|
ml
|
SRR1103376
|
HR-TB
|
lineage4.1
|
None
|
SRR1103591
|
MDR-TB
|
lineage4.1
|
None
|
SRR11342672
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2027300
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4821432
|
HR-TB
|
lineage1.1.3.1;lineage4.1.3
|
None
|
ERR9786414
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231166
|
MDR-TB
|
lineage4.1
|
ml
|
ERR4814472
|
Other
|
lineage4.1
|
None
|
SRR998785
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680226
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR3806663
|
HR-TB
|
lineage4.1.3
|
None
|
ERR551192
|
Sensitive
|
lineage4.1
|
None
|
ERR9786401
|
Other
|
lineage4.1
|
None
|
ERR552160
|
Sensitive
|
lineage4.1
|
None
|
ERR11082331
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4828982
|
MDR-TB
|
lineage4.1.3
|
it
|
ERR552705
|
Sensitive
|
lineage4.1.3
|
de
|
SRR1049962
|
Sensitive
|
lineage4.1.3;lineage6.3.1
|
None
|
SRR998590
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998849
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786475
|
Sensitive
|
lineage4.1
|
None
|
ERR4829435
|
MDR-TB
|
lineage4.1.3
|
it
|
SAMEA2533765
|
Sensitive
|
lineage4.1
|
None
|
ERR4829570
|
Sensitive
|
lineage4.1
|
it
|
ERR10680159
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR551068
|
HR-TB
|
lineage4.1
|
None
|
SRR7781503
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9117737
|
Sensitive
|
lineage4.1
|
None
|
SRR7517733
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998703
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4822280
|
Other
|
lineage4.1.3
|
None
|
SRR998830
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998612
|
Other
|
lineage4.1.3;lineage6.3.1
|
None
|
SRR998663
|
Sensitive
|
lineage4.1
|
None
|
ERR2679265
|
Sensitive
|
lineage4.1
|
None
|
SRR3724928
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998690
|
Sensitive
|
lineage4.1
|
None
|
ERR10680054
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444089
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4872222
|
RR-TB
|
lineage4.1.3
|
None
|
SRR3724803
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998751
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR4423769
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552117
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231148
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2517391
|
Sensitive
|
lineage4.1
|
nl
|
ERR2679261
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998707
|
Other
|
lineage4.1.3
|
None
|
ERR4822141
|
Sensitive
|
lineage4.1.3
|
None
|
ERR047889
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR2100180
|
Sensitive
|
lineage4.1
|
None
|
ERR9787220
|
Other
|
lineage4.1;lineage6.1.3
|
None
|
ERR552159
|
Sensitive
|
lineage4.1
|
None
|
ERR551192_ERR551193
|
Other
|
lineage4.1
|
None
|
SRR998768
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2200041
|
Sensitive
|
lineage4.1.3
|
de
|
ERR11050442
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231160
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998784
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786572
|
Sensitive
|
lineage4.1
|
None
|
ERR9786792
|
Sensitive
|
lineage4.1
|
None
|
ERR4815604
|
Other
|
|
None
|
SRR998843
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4818644
|
Sensitive
|
lineage4.1.3
|
gb
|
SAMN02231172
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5535708
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423540
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552116
|
Sensitive
|
lineage4.1
|
None
|
ERR2679268
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517807
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998666
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11049437
|
HR-TB
|
lineage4.1.3
|
None
|
ERR552467
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231134
|
Sensitive
|
lineage4.1.3
|
None
|
ERR551193
|
Other
|
lineage4.1
|
None
|
ERR4817571
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR998757
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3725722
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR8774490
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552858
|
HR-TB
|
lineage4.1.3
|
de
|
ERR4195507
|
Sensitive
|
lineage4.1.3
|
None
|
ERR13285117
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680112
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4820469
|
Sensitive
|
lineage4.1
|
gb
|
ERR10680168
|
MDR-TB
|
lineage4.1
|
None
|
ERR10680040
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4821575
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR13180418
|
Other
|
lineage4.1
|
None
|
SRR11461699
|
Sensitive
|
lineage4.1.3
|
None
|
SRR3724662
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR998730
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231123
|
Sensitive
|
lineage4.1.3
|
None
|
ERR3148158
|
RR-TB
|
lineage4.1.2.1
|
mx
|
ERR4821778
|
Other
|
lineage4.1.3
|
None
|
SRR11444317
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998688
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998834
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9124956
|
HR-TB
|
lineage4.1.3
|
None
|
SAMN02231180
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680031
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786148
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11082111
|
Sensitive
|
lineage4.1
|
None
|
ERR551568
|
MDR-TB
|
lineage4.1
|
None
|
SRR21690992
|
Sensitive
|
lineage4.1.3
|
None
|
SRR19317575
|
Sensitive
|
lineage4.1
|
None
|
SRR28375412
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1049966
|
Sensitive
|
lineage4.1.3
|
None
|
ERR047890
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1162482
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1162775
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231190
|
MDR-TB
|
lineage4.1.3
|
ml
|
ERR2510806
|
Sensitive
|
lineage4.1
|
it
|
ERR2516542
|
MDR-TB
|
lineage4.1.3
|
nl
|
ERR2516606
|
MDR-TB
|
lineage4.1.3
|
nl
|
SRR998744
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998851
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29906762
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR047885
|
MDR-TB
|
lineage4.1.3
|
gb
|
ERR4811451
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4816401
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1145855
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11081472
|
Sensitive
|
lineage4.1
|
None
|
ERR11082415
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680146
|
MDR-TB
|
lineage4.1
|
None
|
SRR1049964
|
Other
|
lineage4.1.3
|
None
|
SRR11444129
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1162478
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1162691
|
MDR-TB
|
lineage4.1
|
None
|
SRR2100065
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998792
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998813
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444304
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
SRR1162737
|
HR-TB
|
lineage4.1
|
None
|
ERR2516162
|
Sensitive
|
lineage4.1.3
|
es
|
SRR7517681
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR11049741
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13284737
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680154
|
MDR-TB
|
lineage4.1
|
None
|
SAMN02231126
|
Other
|
lineage4.1.3
|
None
|
ERR551569
|
MDR-TB
|
lineage4.1
|
None
|
SRR26112823
|
HR-TB
|
lineage4.1
|
None
|
ERR10680100
|
MDR-TB
|
lineage4.1
|
None
|
ERR10680211
|
MDR-TB
|
lineage4.1
|
None
|
ERR8774079
|
Sensitive
|
lineage4.1
|
None
|
ERR3806591
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786298
|
Sensitive
|
lineage4.1
|
None
|
ERR9786801
|
Sensitive
|
lineage4.1
|
None
|
ERR8774156
|
Sensitive
|
lineage4.1
|
None
|
SRR11444288
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1162763
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21689444
|
Sensitive
|
lineage4.1
|
None
|
ERR1679586
|
MDR-TB
|
lineage4.1.3
|
ng
|
ERR2517547
|
MDR-TB
|
lineage4.1
|
nl
|
SRR26112486
|
Sensitive
|
lineage4.1
|
None
|
ERR9786660
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998794
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423554
|
RR-TB
|
lineage4.1.3
|
None
|
ERR10680078
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444260
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4815780
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR230062
|
Sensitive
|
lineage4.1
|
None
|
ERR4819728
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552160_ERR552159
|
Other
|
lineage4.1
|
None
|
SRR1103381
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516255
|
MDR-TB
|
lineage4.1.3
|
be
|
ERR11080843
|
Sensitive
|
lineage4.1.3
|
None
|
ERR551069_ERR551067_ERR551068
|
HR-TB
|
lineage4.1
|
None
|
SAMN02231168
|
HR-TB
|
lineage4.1
|
ml
|
SRR998588
|
Other
|
lineage4.1.3
|
None
|
SRR998679
|
RR-TB
|
lineage4.1.3
|
None
|
SRR998798
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998835
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998831
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998841
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998752
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1162694
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444164
|
Sensitive
|
lineage4.1.3
|
None
|
ERR10679999
|
MDR-TB
|
lineage4.1
|
None
|
ERR10680036
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724802
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680189
|
MDR-TB
|
lineage4.1
|
None
|
ERR4811443
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4821128
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786441
|
Other
|
lineage4.1
|
None
|
SRR998750
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR29055889
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9119506
|
RR-TB
|
lineage4.1.3
|
None
|
ERR11067818
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679311
|
Sensitive
|
lineage4.1
|
None
|
SRR21675940
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR550713
|
Sensitive
|
lineage4.1
|
de
|
SRR1162480
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR550698
|
HR-TB
|
lineage4.1.3
|
de
|
ERR9786237
|
Sensitive
|
lineage4.1
|
None
|
ERR551102
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1577829
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29126558
|
Sensitive
|
lineage4.1
|
None
|
SRR5535687
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577823
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR551001
|
Sensitive
|
lineage4.1.3
|
de
|
ERR3806838
|
Sensitive
|
lineage4.1.3
|
None
|
ERR3324352
|
HR-TB
|
lineage4.1.3
|
None
|
ERR3806654
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4423558
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9119616
|
RR-TB
|
lineage4.1.3
|
None
|
ERR9786849
|
Sensitive
|
lineage4.1
|
None
|
SRR998811
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998810
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516344
|
MDR-TB
|
lineage4.1.3
|
be
|
ERR9786910
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2446332
|
MDR-TB
|
lineage4.1
|
nl
|
SRR29126646
|
Other
|
lineage4.1
|
None
|
ERR3803775
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4821525
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4821800
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR998735
|
Sensitive
|
lineage4.1.3
|
None
|
ERR3804038
|
Other
|
lineage4.1.3
|
None
|
SRR22251556
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774049
|
Sensitive
|
lineage4.1
|
None
|
ERR552844
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR998706
|
Other
|
lineage4.1.3
|
None
|
SRR3725712
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR1162474
|
Sensitive
|
lineage4.1.3
|
None
|
SRR11444384
|
Sensitive
|
lineage4.1.3
|
None
|
SRR16058495
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4423636
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11043448
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11043475
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998705
|
Other
|
lineage4.1.3
|
None
|
ERR4423548
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4817692
|
HR-TB
|
lineage1.1.2;lineage4
|
None
|
ERR3806610
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231138
|
Sensitive
|
lineage4.1
|
None
|
SRR11461690
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786217
|
Other
|
lineage4.1
|
None
|
ERR234198
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998589
|
Sensitive
|
lineage4.1.3
|
None
|
ERR10680041
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998633
|
Sensitive
|
lineage4.1
|
None
|
SRR11444403
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4817961
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786308
|
Other
|
lineage4.1.3
|
None
|
ERR3324332
|
Sensitive
|
lineage4.1
|
None
|
ERR4816198
|
Sensitive
|
lineage4.1.3
|
None
|
SRR3732647
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9117834
|
Sensitive
|
lineage4.1
|
None
|
SRR998829
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1162770
|
Sensitive
|
lineage4.1.3
|
None
|
ERR3806848
|
HR-TB
|
lineage4.1.3
|
None
|
ERR552117_ERR552116
|
Sensitive
|
lineage4.1
|
None
|
ERR4819068
|
Sensitive
|
lineage1.1;lineage4.1.3
|
None
|
SRR1577836
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998745
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR5535691
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11050363
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2516380
|
Sensitive
|
lineage4.1
|
be
|
ERR10680193
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786979
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1103397
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231164
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998754
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552432
|
MDR-TB
|
lineage4.1.3
|
cg
|
ERR4829610
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774231
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR3725719
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR1162773
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR10680083
|
MDR-TB
|
lineage4.1
|
None
|
ERR8774047
|
Sensitive
|
lineage4.1
|
None
|
SRR7517792
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR2679247
|
RR-TB
|
lineage4.1.3
|
None
|
SRR29126625
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29126717
|
Sensitive
|
lineage4.1
|
None
|
ERR551067
|
HR-TB
|
lineage4.1
|
None
|
ERR552132
|
Other
|
lineage4.1
|
None
|
SRR1049968
|
Pre-XDR-TB
|
lineage4.1.3
|
ml
|
ERR10680158
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786741
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786932
|
Sensitive
|
lineage4.1
|
None
|
SRR21675704
|
Other
|
lineage4.1.3
|
None
|
SRR29053158
|
Sensitive
|
lineage4.1
|
None
|
ERR13261903
|
RR-TB
|
lineage4.1
|
None
|
ERR2679260
|
Sensitive
|
lineage4.1
|
None
|
ERR4818717
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786726
|
Sensitive
|
lineage4.1
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR9891996
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231107
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231175
|
MDR-TB
|
lineage4.1.3
|
ml
|
SRR7517788
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR7517790
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR3724998
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR13284399
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998591
|
Other
|
lineage4.1.3
|
None
|
SRR998669
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998714
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998747
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998771
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998840
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11082803
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4829008
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4829014
|
MDR-TB
|
lineage4.1.3
|
it
|
ERR10680129
|
MDR-TB
|
lineage4.1
|
None
|
ERR4815192
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998632
|
Sensitive
|
lineage4.1
|
None
|
SRR998766
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21690851
|
Sensitive
|
lineage4.1.3
|
None
|
SRR29341565
|
Sensitive
|
lineage4.1
|
None
|
ERR3148205
|
RR-TB
|
lineage4.1.2.1
|
mx
|
SRR3724791
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998712
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4817479
|
Other
|
lineage4.1.3
|
None
|
SRR998738
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998777
|
Sensitive
|
lineage4.1
|
None
|
ERR10680087
|
MDR-TB
|
lineage4.1
|
None
|
ERR9786251
|
Sensitive
|
lineage4.1
|
None
|
SRR16370456
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4407533
|
Sensitive
|
lineage4.1
|
None
|
ERR2679313
|
Sensitive
|
lineage4.1.3
|
None
|
SAMEA2534424
|
Sensitive
|
lineage4.1
|
None
|
ERR551101_ERR551102
|
HR-TB
|
lineage4.1.3
|
None
|
ERR3806828
|
Other
|
lineage4.1.3
|
None
|
SRR998691
|
Sensitive
|
lineage4.1
|
None
|
SRR11444031
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4423553
|
Other
|
lineage4.1.3
|
None
|
ERR3275268
|
Sensitive
|
lineage4.1
|
nl
|
ERR2679315
|
Sensitive
|
lineage4.1.3
|
None
|
ERR8774158
|
Sensitive
|
lineage4.1
|
None
|
SRR1577811
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423600
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4811392
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4818945
|
Sensitive
|
lineage4.1.3
|
None
|
ERR550633
|
Sensitive
|
lineage4.1
|
de
|
ERR4828916
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR553332
|
HR-TB
|
lineage4.1.3
|
de
|
ERR3806622
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11068129
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3724819
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679253
|
Sensitive
|
lineage4.1
|
None
|
SRR18912997
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11082135
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1049963
|
RR-TB
|
lineage4.1.3
|
None
|
ERR11082079
|
Sensitive
|
lineage4.1
|
None
|
SRR1145859
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR1952138
|
MDR-TB
|
lineage4.1.3
|
ie
|
SRR18911981
|
Sensitive
|
lineage4.1
|
None
|
ERR9786157
|
Sensitive
|
lineage4.1
|
None
|
SAMEA2533673
|
HR-TB
|
lineage4.1
|
None
|
SRR3724965
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR11444380
|
Sensitive
|
lineage4.1.3
|
None
|
ERR10796548
|
Sensitive
|
lineage4.1
|
None
|
SRR2100687
|
Sensitive
|
lineage4.1
|
None
|
SRR1162481
|
MDR-TB
|
lineage4.1
|
None
|
ERR9786789
|
Sensitive
|
lineage4.1
|
None
|
ERR11082668
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR11082587
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786397
|
Other
|
lineage4.1
|
None
|
SRR998839
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680106
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998765
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679288
|
Sensitive
|
lineage4.1
|
None
|
SRR998689
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9030305
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR8774127
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998846
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998667
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998729
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4811436
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998759
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR3324356
|
Other
|
lineage4.1
|
None
|
ERR11043574
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998614
|
Other
|
lineage4.1.3;lineage6.3.1
|
None
|
ERR4817587
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR7517808
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680092
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4822101
|
Sensitive
|
lineage1.1.2;lineage4.1.3
|
None
|
ERR9786947
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231104
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2679273
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR26112351
|
HR-TB
|
lineage4.1
|
None
|
ERR10680025
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4872137
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998664
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998764
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998852
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR12554784
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2679244
|
Sensitive
|
lineage4.1
|
None
|
ERR9786487
|
Other
|
lineage4.1
|
None
|
SAMEA2534452
|
Sensitive
|
lineage4.1
|
None
|
ERR551569_ERR551568
|
MDR-TB
|
lineage4.1
|
None
|
ERR4818005
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9030410
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786223
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998671
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998773
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR998793
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998816
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998802
|
MDR-TB
|
lineage4.1.3;lineage5.1.1
|
None
|
SRR998838
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11043012
|
HR-TB
|
lineage4.1.3
|
None
|
ERR10679996
|
MDR-TB
|
lineage4.1
|
None
|
ERR11067910
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR29053196
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6045622
|
Sensitive
|
lineage4.1.3
|
gb
|
SAMN02231183
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786352
|
Sensitive
|
lineage4.1
|
None
|
ERR552879
|
Sensitive
|
lineage4.1
|
None
|
SRR998728
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998753
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4821377
|
HR-TB
|
lineage4.1.3
|
gb
|
SRR1049971
|
Sensitive
|
lineage4.1
|
None
|
SRR1162468
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786835
|
Other
|
lineage4.1
|
None
|
SRR1577835
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4407537
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998797
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786332
|
Other
|
lineage4.1
|
None
|
ERR4817581
|
HR-TB
|
lineage4.1.3
|
gb
|
ERR11049061
|
Other
|
lineage4.1.3
|
None
|
ERR4821334
|
Other
|
lineage4.1.3
|
None
|
SRR19325549
|
Other
|
lineage4.1
|
None
|
ERR10680098
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR6046222
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR3725718
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR3724807
|
MDR-TB
|
lineage4.1.3
|
ci
|
SRR21690384
|
Other
|
lineage4.1.3
|
None
|
SAMN02231173
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444383
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998837
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2679256
|
Other
|
lineage4.1.3
|
None
|
ERR9786691
|
Other
|
lineage4.1
|
None
|
SRR998850
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21689723
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4821083
|
Sensitive
|
lineage4.1.3
|
gb
|
ERR4423557
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4423592
|
Other
|
lineage4.1.3
|
None
|
ERR4819001
|
Sensitive
|
lineage4.1.3
|
gb
|
ERR4423770
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR3806607
|
Other
|
lineage4.1
|
None
|
ERR9786998
|
HR-TB
|
lineage4.1.3
|
None
|
SRR023476
|
HR-TB
|
lineage4.1.3
|
None
|
SRR29126974
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998786
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4818662
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680142
|
RR-TB
|
lineage4.1
|
None
|
SRR998755
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577824
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3725693
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679269
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR551101
|
HR-TB
|
lineage4.1.3
|
None
|
ERR10680018
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9121710
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786766
|
Sensitive
|
lineage4.1
|
None
|
SRR7070478
|
Sensitive
|
lineage4.1.3
|
None
|
SRR7131269
|
Sensitive
|
lineage4.1
|
None
|
SRR998824
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998809
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2199984
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998635
|
Sensitive
|
lineage4.1
|
None
|
SRR998668
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4820741
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR3732698
|
Sensitive
|
lineage4.1.3
|
ci
|
ERR11049264
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR553226
|
MDR-TB
|
lineage4.1
|
None
|
ERR4872100
|
RR-TB
|
lineage4.1.3
|
None
|
SRR6511614
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423489
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
ERR3324369
|
Sensitive
|
lineage4.1
|
None
|
ERR8774492
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998701
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4423595
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9899670
|
Sensitive
|
lineage4.1.3
|
None
|
SAMN02231153
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR21676520
|
Other
|
lineage4.1
|
None
|
SAMN02231159
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR751340
|
Sensitive
|
lineage4.1
|
None
|
SAMEA2534034
|
MDR-TB
|
lineage4.1
|
None
|
SRR21710726
|
HR-TB
|
lineage4.1.3
|
None
|
SAMN02231161
|
Pre-XDR-TB
|
lineage4.1.3
|
ml
|
SAMN02231156
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231186
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4821488
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4829691
|
MDR-TB
|
lineage4.1.3
|
it
|
SRR998684
|
Other
|
lineage4.1.3
|
None
|
SRR998739
|
Sensitive
|
lineage4.1.3
|
None
|
ERR552466
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998746
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680208
|
MDR-TB
|
lineage4.1
|
None
|
ERR4815502
|
Other
|
lineage4.1
|
None
|
ERR551482
|
Sensitive
|
lineage4.1.3
|
de
|
SRR21678374
|
Sensitive
|
lineage4.1.3
|
None
|
SRR22048322
|
Sensitive
|
lineage4.1
|
None
|
ERR9786897
|
Other
|
lineage4.1
|
None
|
SAMN02231105
|
Sensitive
|
lineage4.1.3
|
None
|
ERR047887
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11044595
|
Sensitive
|
lineage4.1
|
None
|
SRR998748
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR3725703
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998756
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11067446
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786379
|
Other
|
lineage4.1
|
None
|
ERR8774082
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231145
|
Sensitive
|
lineage4.1.3
|
ml
|
ERR11043903
|
MDR-TB
|
lineage4.1
|
None
|
ERR13289986
|
Sensitive
|
lineage4.1.3
|
None
|
ERR2679259
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11080823
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998799
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998815
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9901095
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1162774
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998686
|
Other
|
lineage4.1.3
|
None
|
SRR998713
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998741
|
MDR-TB
|
lineage4.1.3;lineage6.3.1
|
None
|
SRR16370440
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679284
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516714
|
MDR-TB
|
lineage4.1.3
|
nl
|
ERR3275330
|
MDR-TB
|
lineage4.1
|
nl
|
ERR1367610
|
Sensitive
|
lineage4.1
|
None
|
ERR4423484
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1103621
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SAMN02231155
|
MDR-TB
|
lineage4.1.3
|
None
|
SAMN02231185
|
MDR-TB
|
lineage4.1.3
|
ml
|
SAMN02231187
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4814683
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
SRR998715
|
Sensitive
|
lineage4.1.3
|
None
|
SRR6046179
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4816100
|
Sensitive
|
lineage1.1.2;lineage4.1.2.1;lineage4.1.3
|
None
|
ERR8774387
|
Sensitive
|
lineage4.1
|
None
|
ERR11082308
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786207
|
Other
|
lineage4.1
|
None
|
ERR9786147
|
Sensitive
|
lineage4.1
|
None
|
ERR9786638
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786772
|
Sensitive
|
lineage4.1.3
|
None
|
SRR16100243
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2516489
|
MDR-TB
|
lineage4.1.3
|
nl
|
ERR4820549
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR998844
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998796
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR21690738
|
HR-TB
|
lineage4.1.3
|
None
|
ERR551069
|
HR-TB
|
lineage4.1
|
None
|
SRR2101824
|
Sensitive
|
lineage4.1
|
None
|
SRR998634
|
Sensitive
|
lineage4.1
|
None
|
SRR998702
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998778
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR998833
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998845
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2446330
|
Sensitive
|
lineage4.1
|
nl
|
SRR998733
|
Sensitive
|
lineage4.1.3
|
None
|
ERR3804034
|
HR-TB
|
lineage4.1.3
|
None
|
SRR5535723
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1049970
|
Pre-XDR-TB
|
lineage4.1.3
|
None
|
SRR7069454
|
HR-TB
|
lineage4.1.3
|
None
|
ERR13291810
|
HR-TB
|
lineage4.1.3
|
None
|
ERR047882
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR13290016
|
HR-TB
|
lineage4.1.3
|
None
|
ERR2200071
|
HR-TB
|
lineage4.1.3
|
de
|
ERR10680022
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1103500
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR11444211
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998769
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2679312
|
Sensitive
|
lineage4.1
|
None
|
ERR2514497
|
Sensitive
|
lineage4.1.3
|
gb
|
ERR4872136
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786222
|
Other
|
lineage4.1
|
None
|
SRR998814
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4816120
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786784
|
Sensitive
|
lineage4.1.3
|
None
|
SRR7131128
|
Sensitive
|
lineage4.1
|
None
|
SRR998698
|
HR-TB
|
lineage4.1.3;lineage4.6.2.2
|
None
|
SRR998823
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998842
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4423523
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680050
|
MDR-TB
|
lineage4.1
|
None
|
ERR10680116
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4814433
|
Sensitive
|
lineage4.1.3
|
None
|
ERR11049664
|
Sensitive
|
lineage4.1
|
None
|
ERR2679308
|
Sensitive
|
lineage4.1.3
|
None
|
SRR23252658
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11067623
|
Sensitive
|
lineage4.1.3
|
None
|
ERR123944
|
Sensitive
|
lineage4.1
|
None
|
SRR21659818
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786101
|
Sensitive
|
lineage4.1
|
None
|
SRR998731
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4816787
|
Sensitive
|
lineage4.1.3
|
None
|
ERR13292384
|
Sensitive
|
lineage4.1
|
None
|
SRR7069949
|
HR-TB
|
lineage4.1.3
|
None
|
ERR10680000
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680222
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786618
|
Other
|
lineage4.1.3
|
None
|
SRR11444341
|
Sensitive
|
lineage4.1.3
|
None
|
ERR4815515
|
Sensitive
|
lineage1.1.2;lineage4.1.3
|
None
|
SRR1162475
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR11081053
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR4815976
|
Sensitive
|
lineage4.1.3
|
gb
|
SRR998832
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR2516657
|
Pre-XDR-TB
|
lineage4.1.3
|
nl
|
ERR9786303
|
Sensitive
|
lineage4.1
|
None
|
ERR9786506
|
Sensitive
|
lineage2.2.1;lineage4.1.2.1;lineage4.7
|
None
|
SRR29055892
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR552843
|
HR-TB
|
lineage4.1.3
|
cg
|
ERR553173
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9901818
|
HR-TB
|
lineage4.1.3
|
None
|
SRR7781511
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR10680118
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR047888
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786862
|
Sensitive
|
lineage4.1
|
None
|
ERR9786915
|
HR-TB
|
lineage4.1
|
None
|
SRR7517684
|
Sensitive
|
lineage4.1.3
|
ci
|
SRR5535774
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998742
|
MDR-TB
|
lineage4.1.3;lineage6.3.1
|
None
|
SRR998767
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR998758
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR3724971
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7517794
|
MDR-TB
|
lineage4.1.3
|
ci
|
ERR4829980
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786811
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11069032
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998687
|
Other
|
lineage4.1.3
|
None
|
SRR1049959
|
Sensitive
|
lineage4.1;lineage6.3.1
|
None
|
SRR6930934
|
Pre-XDR-TB
|
lineage4.1
|
None
|
ERR9786493
|
Other
|
lineage4.1
|
None
|
ERR13292430
|
Sensitive
|
lineage4.1.3
|
None
|
SRR998848
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR9786812
|
HR-TB
|
lineage4.1.3
|
None
|
SRR998836
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1577810
|
Sensitive
|
lineage4.1.3
|
None
|
ERR9786134
|
Other
|
lineage4.1
|
None
|
ERR502504
|
HR-TB
|
lineage4.1.3;lineage6.2.1
|
None
|
SRR18913757
|
Sensitive
|
lineage4.1.3
|
None
|
SRR11444081
|
Sensitive
|
lineage4.1.3
|
None
|
SRR1049972
|
MDR-TB
|
lineage4.1.3
|
ml
|
SRR5535684
|
HR-TB
|
lineage4.1.3
|
None
|