Rv0682 - c.-139C>A


Drug resistance types
295 Sensitive 16 RR-TB 90 HR-TB 295 MDR-TB 22 Pre-XDR-TB 0 XDR-TB 64 Other
lineage Counts
lineage Count
lineage4.1 191
lineage4.1.3 561
lineage4.1.3;lineage6.3.1 5
lineage4.1;lineage6.1.3 1
lineage4 1
lineage2.2.1;lineage4.1.2.1;lineage4.7 1
lineage1.1.2;lineage4 1
lineage4.1;lineage6.3.1 1
1
lineage4.1.3;lineage5.1.1 2
lineage1.1;lineage4.1.3 2
lineage1.1.2;lineage4.1 2
lineage4.1.3;lineage4.6.2.2 1
lineage4.1.2.1 4
lineage1.1.1 1
lineage1.1.3.1;lineage4.1.3 1
lineage1.1.2;lineage4.1.3 1
lineage1.1;lineage4.1.2.1 1
lineage4.1;lineage4.9 1
lineage4.1.3;lineage6.2.1 1
lineage4.1.1.1;lineage4.1.3 1
lineage2.2.1;lineage4.1 1
spoligotype Counts
spoligotype Count
None 782
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR998632 Sensitive lineage4.1 None
SRR998766 MDR-TB lineage4.1.3 None
SRR21690851 Sensitive lineage4.1.3 None
ERR10680100 MDR-TB lineage4.1 None
ERR10680211 MDR-TB lineage4.1 None
SRR7517793 MDR-TB lineage4.1.3 ci
SRR7517794 MDR-TB lineage4.1.3 ci
SRR7517788 MDR-TB lineage4.1.3 ci
SRR7517789 MDR-TB lineage4.1.3 ci
SRR7517790 MDR-TB lineage4.1.3 ci
SRR7517791 MDR-TB lineage4.1.3 ci
ERR3806591 Sensitive lineage4.1.3 None
ERR9786298 Sensitive lineage4.1 None
ERR9786801 Sensitive lineage4.1 None
SRR11443991 MDR-TB lineage4.1.3 None
SRR1103616 Sensitive lineage4.1.3 None
ERR8774156 Sensitive lineage4.1 None
SRR11444288 Sensitive lineage4.1.3 None
SRR1162763 MDR-TB lineage4.1.3 None
ERR2679263 MDR-TB lineage4.1.3 None
SRR3724791 MDR-TB lineage4.1.3 None
ERR11044241 Sensitive lineage4.1.3 None
SRR998670 Sensitive lineage4.1.3 None
ERR8774081 Sensitive lineage4.1 None
ERR2517391 Sensitive lineage4.1 nl
SRR998665 Sensitive lineage4.1.3 None
ERR4195357 Sensitive lineage4.1.3 None
ERR2517547 MDR-TB lineage4.1 nl
ERR10680078 MDR-TB lineage4.1.3 None
ERR230062 Sensitive lineage4.1 None
ERR4818945 Sensitive lineage4.1.3 None
ERR4819728 MDR-TB lineage4.1.3 None
ERR3806622 HR-TB lineage4.1.3 None
SRR998749 Pre-XDR-TB lineage4.1.3 None
ERR551069_ERR551067_ERR551068 HR-TB lineage4.1 None
SRR29055974 Sensitive lineage4.1 None
SRR998588 Other lineage4.1.3 None
SRR998679 RR-TB lineage4.1.3 None
SRR998798 MDR-TB lineage4.1.3 None
SRR998831 MDR-TB lineage4.1.3 None
SRR998841 MDR-TB lineage4.1.3 None
SRR998752 MDR-TB lineage4.1.3 None
ERR11082135 MDR-TB lineage4.1.3 None
ERR11068224 Sensitive lineage4.1 None
SRR1049975 MDR-TB lineage4.1.3 None
SRR1049967 Sensitive lineage4.1.3 ml
SRR1049963 RR-TB lineage4.1.3 None
ERR11082079 Sensitive lineage4.1 None
SRR11444164 Sensitive lineage4.1.3 None
SRR1145859 MDR-TB lineage4.1.3 None
SRR3724802 MDR-TB lineage4.1.3 None
ERR10680189 MDR-TB lineage4.1 None
ERR2027300 Sensitive lineage4.1.3 None
ERR9786414 Sensitive lineage4.1 None
ERR9119506 RR-TB lineage4.1.3 None
SRR998785 MDR-TB lineage4.1.3 None
ERR10680226 MDR-TB lineage4.1.3 None
ERR11067818 MDR-TB lineage4.1.3 None
ERR3806663 HR-TB lineage4.1.3 None
ERR551192 Sensitive lineage4.1 None
ERR9786401 Other lineage4.1 None
ERR552160 Sensitive lineage4.1 None
ERR2679311 Sensitive lineage4.1 None
SRR11444380 Sensitive lineage4.1.3 None
SRR21675940 MDR-TB lineage4.1.3 None
ERR10796548 Sensitive lineage4.1 None
SRR1162480 Pre-XDR-TB lineage4.1.3 None
SRR1162481 MDR-TB lineage4.1 None
SRR998849 MDR-TB lineage4.1.3 None
ERR9786789 Sensitive lineage4.1 None
ERR9786397 Other lineage4.1 None
ERR9786475 Sensitive lineage4.1 None
ERR551068 HR-TB lineage4.1 None
ERR551102 HR-TB lineage4.1.3 None
SRR1577829 MDR-TB lineage4.1.3 None
SRR5535687 MDR-TB lineage4.1.3 None
ERR3806838 Sensitive lineage4.1.3 None
SRR998765 MDR-TB lineage4.1.3 None
ERR2679288 Sensitive lineage4.1 None
SRR998830 MDR-TB lineage4.1.3 None
SRR998612 Other lineage4.1.3;lineage6.3.1 None
SRR998663 Sensitive lineage4.1 None
SRR1162694 MDR-TB lineage4.1.3 None
ERR3324352 HR-TB lineage4.1.3 None
SAMN02231180 MDR-TB lineage4.1.3 None
SAMN02231186 MDR-TB lineage4.1.3 None
ERR2679265 Sensitive lineage4.1 None
ERR3806654 HR-TB lineage4.1.3 None
ERR8774231 Pre-XDR-TB lineage4.1.3 None
ERR8774387 Sensitive lineage4.1 None
SRR998689 HR-TB lineage4.1.3 None
ERR9030305 MDR-TB lineage4.1.3 None
ERR9119616 RR-TB lineage4.1.3 None
ERR9786849 Sensitive lineage4.1 None
ERR10680054 MDR-TB lineage4.1.3 None
SRR11444089 HR-TB lineage4.1.3 None
SRR998846 MDR-TB lineage4.1.3 None
SRR998667 Sensitive lineage4.1.3 None
SRR998729 Sensitive lineage4.1.3 None
ERR552117 Sensitive lineage4.1 None
ERR4821525 Sensitive lineage4.1.3 None
SRR5535691 MDR-TB lineage4.1.3 None
ERR3275330 MDR-TB lineage4.1 nl
ERR4822141 Sensitive lineage4.1.3 None
SRR29126646 Other lineage4.1 None
SRR998735 Sensitive lineage4.1.3 None
ERR9786947 Sensitive lineage4.1 None
ERR047889 MDR-TB lineage4.1.3 None
SRR998813 MDR-TB lineage4.1.3 None
SRR998814 MDR-TB lineage4.1.3 None
SRR998815 MDR-TB lineage4.1.3 None
SRR998833 MDR-TB lineage4.1.3 None
SRR998816 MDR-TB lineage4.1.3 None
SRR998834 MDR-TB lineage4.1.3 None
ERR9787220 Other lineage4.1;lineage6.1.3 None
SRR998835 MDR-TB lineage4.1.3 None
SRR998836 MDR-TB lineage4.1.3 None
ERR3275879 Sensitive lineage4.1.3 nl
ERR3804038 Other lineage4.1.3 None
SAMN02231160 MDR-TB lineage4.1.3 None
SRR998784 MDR-TB lineage4.1.3 None
ERR3275268 Sensitive lineage4.1 nl
ERR9786572 Sensitive lineage4.1 None
ERR9786792 Sensitive lineage4.1 None
SRR998843 MDR-TB lineage4.1.3 None
SAMN02231172 MDR-TB lineage4.1.3 None
SRR5535708 MDR-TB lineage4.1.3 None
ERR8774049 Sensitive lineage4.1 None
ERR4423540 MDR-TB lineage4.1.3 None
ERR9786487 Other lineage4.1 None
ERR552844 HR-TB lineage4.1.3 None
ERR551569_ERR551568 MDR-TB lineage4.1 None
ERR4818005 Sensitive lineage4.1.3 None
SRR11444384 Sensitive lineage4.1.3 None
SRR16058495 HR-TB lineage4.1.3 None
ERR4818805 Sensitive lineage4.1.3 None
ERR11043448 HR-TB lineage4.1.3 None
ERR11043475 MDR-TB lineage4.1.3 None
SRR998666 Sensitive lineage4.1.3 None
ERR2516475 MDR-TB lineage4.1.3 None
ERR3324345 RR-TB lineage4.1 None
ERR11049437 HR-TB lineage4.1.3 None
ERR10679996 MDR-TB lineage4.1 None
ERR552467 Sensitive lineage4.1.3 None
ERR13290016 HR-TB lineage4.1.3 None
SAMN02231134 Sensitive lineage4.1.3 None
ERR4821334 Other lineage4.1.3 None
ERR3806610 Sensitive lineage4.1.3 None
ERR4822280 Other lineage4.1.3 None
SRR11461690 MDR-TB lineage4.1.3 None
ERR9786217 Other lineage4.1 None
ERR10680041 MDR-TB lineage4.1.3 None
SRR998633 Sensitive lineage4.1 None
ERR10680168 MDR-TB lineage4.1 None
ERR10680040 MDR-TB lineage4.1.3 None
SRR29055652 Sensitive lineage4.1 None
SRR13180260 HR-TB lineage4.1.3 None
SRR29906762 MDR-TB lineage4.1.3 None
SRR13180418 Other lineage4.1 None
SRR11444403 Sensitive lineage4.1.3 None
ERR9786352 Sensitive lineage4.1 None
SRR998728 Sensitive lineage4.1.3 None
SRR998753 MDR-TB lineage4.1.3 None
ERR13284343 MDR-TB lineage4.1.3 None
SRR29126878 Sensitive lineage4.1 None
ERR9786526 Other lineage4.1 None
SRR1049971 Sensitive lineage4.1 None
SRR11444317 HR-TB lineage4.1.3 None
SRR1162468 MDR-TB lineage4.1.3 None
SRR29126694 HR-TB lineage4.1.3 None
ERR3806848 HR-TB lineage4.1.3 None
SRR998745 MDR-TB lineage4.1.3 None
ERR9786525 Other lineage4 None
ERR11044595 Sensitive lineage4.1 None
ERR9786440 Other lineage4.1 None
SRR998748 Pre-XDR-TB lineage4.1.3 None
SRR3725703 MDR-TB lineage4.1.3 None
SRR998756 MDR-TB lineage4.1.3 None
ERR11067446 HR-TB lineage4.1.3 None
ERR8774082 Sensitive lineage4.1 None
ERR9786332 Other lineage4.1 None
ERR11043903 MDR-TB lineage4.1 None
SRR998678 RR-TB lineage4.1.3 None
ERR13267627 HR-TB lineage4.1.3 None
SRR7069949 HR-TB lineage4.1.3 None
ERR10680222 MDR-TB lineage4.1.3 None
SRR29126625 MDR-TB lineage4.1.3 None
ERR2679259 Sensitive lineage4.1.3 None
ERR11080823 Sensitive lineage4.1.3 None
SRR1162475 MDR-TB lineage4.1.3 None
ERR11081053 MDR-TB lineage4.1.3 None
ERR2679256 Other lineage4.1.3 None
ERR13284930 HR-TB lineage4.1.3 None
SRR19128035 MDR-TB lineage4.1.3 None
SRR998850 MDR-TB lineage4.1.3 None
SRR998832 MDR-TB lineage4.1.3 None
ERR2679284 MDR-TB lineage4.1.3 None
SRR21689723 HR-TB lineage4.1.3 None
ERR9786303 Sensitive lineage4.1 None
ERR9786506 Sensitive lineage2.2.1;lineage4.1.2.1;lineage4.7 None
ERR4423557 HR-TB lineage4.1.3 None
ERR4423592 Other lineage4.1.3 None
ERR4423770 MDR-TB lineage4.1.3 None
ERR1367610 Sensitive lineage4.1 None
SRR023476 HR-TB lineage4.1.3 None
SRR1103621 Pre-XDR-TB lineage4.1.3 None
SAMN02231155 MDR-TB lineage4.1.3 None
SAMN02231185 MDR-TB lineage4.1.3 ml
SAMN02231187 MDR-TB lineage4.1.3 None
ERR4817692 HR-TB lineage1.1.2;lineage4 None
SRR1049969 Pre-XDR-TB lineage4.1.3 None
SRR998715 Sensitive lineage4.1.3 None
SRR6046179 HR-TB lineage4.1.3 None
SRR1577824 MDR-TB lineage4.1.3 None
ERR10680118 MDR-TB lineage4.1.3 None
SRR3725693 MDR-TB lineage4.1.3 None
ERR2679269 MDR-TB lineage4.1.3 None
ERR551101 HR-TB lineage4.1.3 None
ERR10680018 MDR-TB lineage4.1.3 None
ERR9121710 Sensitive lineage4.1.3 None
ERR047888 MDR-TB lineage4.1.3 None
SRR998844 MDR-TB lineage4.1.3 None
ERR9786766 Sensitive lineage4.1 None
ERR9786862 Sensitive lineage4.1 None
ERR9786915 HR-TB lineage4.1 None
SRR29052695 Sensitive lineage4.1.3 None
SRR998796 MDR-TB lineage4.1.3 None
ERR11069032 Sensitive lineage4.1.3 None
SRR998733 Sensitive lineage4.1.3 None
ERR3804034 HR-TB lineage4.1.3 None
SRR1049959 Sensitive lineage4.1;lineage6.3.1 None
SRR1049970 Pre-XDR-TB lineage4.1.3 None
SRR6930934 Pre-XDR-TB lineage4.1 None
ERR13291810 HR-TB lineage4.1.3 None
SAMN02231161 Pre-XDR-TB lineage4.1.3 ml
ERR3803989 Other lineage4.1.3 None
SAMN02231156 MDR-TB lineage4.1.3 None
ERR552466 Sensitive lineage4.1.3 None
SRR29341565 Sensitive lineage4.1 None
SRR1162472 HR-TB lineage4.1 None
ERR9786806 Other lineage4.1.3 None
SRR998712 Sensitive lineage4.1.3 None
ERR4817479 Other lineage4.1.3 None
SRR998738 Sensitive lineage4.1.3 None
SRR998777 Sensitive lineage4.1 None
ERR2864270 MDR-TB lineage4.1.3 None
SRR26112486 Sensitive lineage4.1 None
ERR9786660 Sensitive lineage4.1.3 None
ERR551101_ERR551102 HR-TB lineage4.1.3 None
SRR3725714 MDR-TB lineage4.1 None
ERR3806828 Other lineage4.1.3 None
SRR998691 Sensitive lineage4.1 None
SRR998794 MDR-TB lineage4.1.3 None
SRR998795 MDR-TB lineage4.1.3 None
SRR11444031 Sensitive lineage4.1.3 None
ERR4423554 RR-TB lineage4.1.3 None
SRR1145851 MDR-TB lineage4.1.3 None
ERR4423553 Other lineage4.1.3 None
ERR11068129 HR-TB lineage4.1.3 None
SRR3724819 MDR-TB lineage4.1.3 None
SRR18912997 Sensitive lineage4.1.3 None
ERR11080843 Sensitive lineage4.1.3 None
ERR4821128 MDR-TB lineage4.1.3 None
ERR4814472 Other lineage4.1 None
SRR18911981 Sensitive lineage4.1 None
ERR9786441 Other lineage4.1 None
ERR4815604 Other None
SRR998750 Pre-XDR-TB lineage4.1.3 None
ERR9786157 Sensitive lineage4.1 None
SRR998590 Sensitive lineage4.1.3 None
ERR9786237 Sensitive lineage4.1 None
ERR11082668 Pre-XDR-TB lineage4.1.3 None
ERR11082587 MDR-TB lineage4.1.3 None
SRR998811 MDR-TB lineage4.1.3 None
ERR8774127 MDR-TB lineage4.1.3 None
ERR4872222 RR-TB lineage4.1.3 None
SRR998810 MDR-TB lineage4.1.3 None
SRR998759 MDR-TB lineage4.1.3 None
SRR998751 Pre-XDR-TB lineage4.1.3 None
ERR3324356 Other lineage4.1 None
ERR11043574 HR-TB lineage4.1.3 None
ERR4423769 MDR-TB lineage4.1.3 None
SRR998614 Other lineage4.1.3;lineage6.3.1 None
ERR9786910 HR-TB lineage4.1.3 None
SAMN02231148 Sensitive lineage4.1.3 None
SRR7517808 MDR-TB lineage4.1.3 None
ERR13284011 MDR-TB lineage4.1.3 None
ERR13286033 MDR-TB lineage4.1.3 None
ERR10680092 MDR-TB lineage4.1.3 None
ERR2679273 MDR-TB lineage4.1.3 None
SRR998664 Sensitive lineage4.1.3 None
SRR998764 HR-TB lineage4.1.3 None
SRR998852 MDR-TB lineage4.1.3 None
ERR11050442 Sensitive lineage4.1.3 None
SRR29126974 MDR-TB lineage4.1.3 None
ERR3276171 Sensitive lineage4.1.3 nl
ERR12554784 Sensitive lineage4.1.3 None
SRR29050607 MDR-TB lineage4.1.3 None
ERR13292384 Sensitive lineage4.1 None
ERR2679268 MDR-TB lineage4.1.3 None
ERR9030410 MDR-TB lineage4.1.3 None
ERR4423636 MDR-TB lineage4.1.3 None
ERR9786223 Sensitive lineage4.1.3 None
SRR7517807 MDR-TB lineage4.1.3 None
SRR998671 Sensitive lineage4.1.3 None
SRR998773 Pre-XDR-TB lineage4.1.3 None
SRR998793 MDR-TB lineage4.1.3 None
SRR998802 MDR-TB lineage4.1.3;lineage5.1.1 None
SRR998838 MDR-TB lineage4.1.3 None
ERR11043012 HR-TB lineage4.1.3 None
SRR998705 Other lineage4.1.3 None
ERR4423548 MDR-TB lineage4.1.3 None
ERR11067910 MDR-TB lineage4.1.3 None
SRR29053196 MDR-TB lineage4.1.3 None
SRR998757 MDR-TB lineage4.1.3 None
SAMN02231138 Sensitive lineage4.1 None
ERR4816100 Sensitive lineage1.1;lineage4.1.3 None
ERR8774490 MDR-TB lineage4.1.3 None
ERR4195507 Sensitive lineage4.1.3 None
ERR13292466 Sensitive lineage4.1.3 None
ERR10680112 MDR-TB lineage4.1.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR998589 Sensitive lineage4.1.3 None
SAMN02231183 MDR-TB lineage4.1.3 None
SRR11461699 Sensitive lineage4.1.3 None
ERR4816198 Sensitive lineage4.1.3 None
SRR998730 Sensitive lineage4.1.3 None
ERR9786835 Other lineage4.1 None
SRR998688 Sensitive lineage4.1.3 None
SRR1577835 Sensitive lineage4.1.3 None
SRR29055994 HR-TB lineage4.1.3 None
ERR552117_ERR552116 Sensitive lineage4.1 None
ERR4819068 Sensitive lineage1.1;lineage4.1.3 None
ERR4822101 Sensitive lineage1.1.2;lineage4.1 None
ERR4407537 Sensitive lineage4.1.3 None
SRR998797 MDR-TB lineage4.1.3 None
SAMN02231105 Sensitive lineage4.1.3 None
SRR1577836 Sensitive lineage4.1.3 None
ERR047887 MDR-TB lineage4.1.3 None
ERR11044463 MDR-TB lineage4.1.3 None
SRR19325549 Other lineage4.1 None
ERR10680098 MDR-TB lineage4.1.3 None
ERR4816787 Sensitive lineage4.1.3 None
ERR9786618 Other lineage4.1.3 None
SRR21690384 Other lineage4.1.3 None
ERR9901095 HR-TB lineage4.1.3 None
SAMN02231173 MDR-TB lineage4.1.3 None
SRR11444383 MDR-TB lineage4.1.3 None
SRR11444341 Sensitive lineage4.1.3 None
SRR1162774 Sensitive lineage4.1.3 None
SRR998837 MDR-TB lineage4.1.3 None
SRR998686 Other lineage4.1.3 None
SRR998713 Sensitive lineage4.1.3 None
SRR998741 MDR-TB lineage4.1.3;lineage6.3.1 None
ERR553173 Sensitive lineage4.1.3 None
ERR3806607 Other lineage4.1 None
ERR9786998 HR-TB lineage4.1.3 None
ERR4423484 MDR-TB lineage4.1.3 None
ERR13289986 Sensitive lineage4.1.3 None
SRR998786 MDR-TB lineage4.1.3 None
ERR4818662 MDR-TB lineage4.1.3 None
SRR5535774 MDR-TB lineage4.1.3 None
SRR998742 MDR-TB lineage4.1.3;lineage6.3.1 None
SRR998767 MDR-TB lineage4.1.3 None
SRR998758 MDR-TB lineage4.1.3 None
ERR551069 HR-TB lineage4.1 None
SRR3724971 MDR-TB lineage4.1.3 None
SRR998634 Sensitive lineage4.1 None
SRR998635 Sensitive lineage4.1 None
SRR7069454 HR-TB lineage4.1.3 None
SRR29055889 MDR-TB lineage4.1.3 None
ERR8774492 MDR-TB lineage4.1.3 None
ERR047882 MDR-TB lineage4.1.3 None
SAMN02231153 Pre-XDR-TB lineage4.1.3 None
SRR21676520 Other lineage4.1 None
ERR10680022 MDR-TB lineage4.1.3 None
SRR998848 MDR-TB lineage4.1.3 None
ERR9786812 HR-TB lineage4.1.3 None
SRR1103500 MDR-TB lineage4.1.3 None
SRR11444211 HR-TB lineage4.1.3 None
SRR998769 MDR-TB lineage4.1.3 None
ERR4819398 Sensitive lineage4.1.3 None
ERR2679312 Sensitive lineage4.1 None
SRR1577810 Sensitive lineage4.1.3 None
SAMN02231159 MDR-TB lineage4.1.3 None
ERR4816120 MDR-TB lineage4.1.3 None
ERR10680096 MDR-TB lineage4.1 None
ERR13260001 MDR-TB lineage4.1.3 None
SRR29053158 Sensitive lineage4.1 None
SRR11444081 Sensitive lineage4.1.3 None
ERR9786784 Sensitive lineage4.1.3 None
ERR4821488 Sensitive lineage4.1.3 None
ERR13273054 HR-TB lineage4.1.3 None
SRR7131128 Sensitive lineage4.1 None
SRR998684 Other lineage4.1.3 None
SRR998739 Sensitive lineage4.1.3 None
SRR998698 HR-TB lineage4.1.3;lineage4.6.2.2 None
SRR998823 MDR-TB lineage4.1.3 None
SRR998842 MDR-TB lineage4.1.3 None
ERR13270283 Sensitive lineage4.1.3 None
ERR4814433 Sensitive lineage4.1.3 None
SRR998737 Sensitive lineage4.1.3 None
ERR13264863 Sensitive lineage4.1.3 None
ERR3148158 RR-TB lineage4.1.2.1 mx
ERR3148205 RR-TB lineage4.1.2.1 mx
ERR2679308 Sensitive lineage4.1.3 None
SRR1049972 MDR-TB lineage4.1.3 ml
SRR5535684 HR-TB lineage4.1.3 None
ERR11067623 Sensitive lineage4.1.3 None
ERR123944 Sensitive lineage4.1 None
ERR13285117 MDR-TB lineage4.1.3 None
SRR3724803 MDR-TB lineage4.1.3 ci
SRR3724965 MDR-TB lineage4.1.3 ci
SRR3724998 MDR-TB lineage4.1.3 ci
SRR3724928 MDR-TB lineage4.1.3 ci
SRR3724807 MDR-TB lineage4.1.3 ci
SRR3724662 MDR-TB lineage4.1.3 ci
SRR3725712 MDR-TB lineage4.1.3 ci
SRR3725708 MDR-TB lineage4.1.3 ci
SRR3725718 MDR-TB lineage4.1.3 ci
SRR3725719 MDR-TB lineage4.1.3 ci
SRR3732698 Sensitive lineage4.1.3 ci
SRR3725722 MDR-TB lineage4.1.3 ci
SRR7517681 MDR-TB lineage4.1.3 ci
SRR7517684 Sensitive lineage4.1.3 ci
ERR8774079 Sensitive lineage4.1 None
SRR7517792 MDR-TB lineage4.1.3 ci
SRR21689444 Sensitive lineage4.1 None
ERR13289725 Sensitive lineage4.1.3 None
ERR10680087 MDR-TB lineage4.1 None
ERR8773495 Sensitive lineage4.1 None
ERR9786251 Sensitive lineage4.1 None
ERR9786457 Sensitive lineage4.1 None
ERR9786938 HR-TB lineage4.1.3 None
SRR16370456 MDR-TB lineage4.1.3 None
ERR4407533 Sensitive lineage4.1 None
ERR4423596 MDR-TB lineage4.1.3 None
ERR2679313 Sensitive lineage4.1.3 None
ERR8774158 Sensitive lineage4.1 None
SRR1577811 MDR-TB lineage4.1.3 None
SRR11444260 Sensitive lineage4.1.3 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4423600 HR-TB lineage4.1.3 None
ERR9786310 Sensitive lineage4.1 None
ERR9786647 Other lineage4.1 None
SRR22249746 HR-TB lineage1.1.1 None
ERR552160_ERR552159 Other lineage4.1 None
SRR998770 MDR-TB lineage4.1.3 None
SRR1103381 MDR-TB lineage4.1.3 None
SRR1103376 HR-TB lineage4.1 None
SRR1103591 MDR-TB lineage4.1 None
SRR11342672 Sensitive lineage4.1.3 None
ERR10679999 MDR-TB lineage4.1 None
ERR10680036 MDR-TB lineage4.1.3 None
ERR4821432 HR-TB lineage1.1.3.1;lineage4.1.3 None
ERR11082331 HR-TB lineage4.1.3 None
SRR1049962 Sensitive lineage4.1.3;lineage6.3.1 None
ERR10680159 MDR-TB lineage4.1.3 None
SRR1103486 MDR-TB lineage4.1.3 None
SRR998839 MDR-TB lineage4.1.3 None
ERR10680106 MDR-TB lineage4.1.3 None
SRR7781503 MDR-TB lineage4.1.3 None
SRR1577823 MDR-TB lineage4.1.3 None
ERR9117737 Sensitive lineage4.1 None
SRR7517733 MDR-TB lineage4.1.3 None
SRR998703 Sensitive lineage4.1.3 None
ERR4423489 Pre-XDR-TB lineage4.1.3 None
ERR4423619 Pre-XDR-TB lineage4.1.3 None
SRR998690 Sensitive lineage4.1 None
ERR4423558 HR-TB lineage4.1.3 None
ERR13284711 MDR-TB lineage4.1 None
ERR2679261 HR-TB lineage4.1.3 None
ERR3803775 Sensitive lineage4.1.3 None
SRR29341551 MDR-TB lineage4.1.3 None
SRR998707 Other lineage4.1.3 None
ERR2446332 MDR-TB lineage4.1 nl
SRR22251556 Sensitive lineage4.1.3 None
ERR13284754 Pre-XDR-TB lineage4.1.3 None
ERR2446330 Sensitive lineage4.1 nl
SAMN02231104 Sensitive lineage4.1.3 None
ERR552159 Sensitive lineage4.1 None
SRR26112351 HR-TB lineage4.1 None
ERR551192_ERR551193 Other lineage4.1 None
ERR13292430 Sensitive lineage4.1.3 None
SRR998768 MDR-TB lineage4.1.3 None
ERR10680025 MDR-TB lineage4.1.3 None
ERR4872137 MDR-TB lineage4.1.3 None
SRR28858464 MDR-TB lineage4.1.3 None
ERR13292093 HR-TB lineage4.1.3 None
ERR2679244 Sensitive lineage4.1 None
ERR552116 Sensitive lineage4.1 None
SRR29126717 Sensitive lineage4.1 None
SRR998706 Other lineage4.1.3 None
SRR1162474 Sensitive lineage4.1.3 None
ERR4815502 Other lineage4.1 None
ERR4815515 Sensitive lineage1.1.2;lineage4.1.3 None
ERR13273117 Sensitive lineage4.1.3 None
ERR551193 Other lineage4.1 None
SRR29126838 Sensitive lineage4.1.3 None
ERR13284972 MDR-TB lineage4.1.3 None
ERR4817961 Sensitive lineage4.1.3 None
ERR4814683 Sensitive lineage1.1;lineage4.1.2.1 None
ERR9786308 Other lineage4.1.3 None
ERR3324332 Sensitive lineage4.1 None
SAMN02231123 Sensitive lineage4.1.3 None
ERR4821778 Other lineage4.1.3 None
SRR3732647 MDR-TB lineage4.1.3 None
ERR9117834 Sensitive lineage4.1 None
SRR998829 MDR-TB lineage4.1.3 None
SRR1162770 Sensitive lineage4.1.3 None
ERR11050363 Sensitive lineage4.1.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786379 Other lineage4.1 None
SRR998731 Sensitive lineage4.1.3 None
ERR13276142 MDR-TB lineage4.1.3 None
SAMN02231145 Sensitive lineage4.1.3 ml
SRR11342671 RR-TB lineage4.1.3 None
SRR29053268 MDR-TB lineage4.1.3 None
ERR11049061 Other lineage4.1.3 None
ERR10680000 MDR-TB lineage4.1.3 None
SRR998799 MDR-TB lineage4.1.3 None
ERR9786691 Other lineage4.1 None
SRR16370440 MDR-TB lineage4.1.3 None
ERR10680142 RR-TB lineage4.1 None
ERR11082308 MDR-TB lineage4.1.3 None
SRR998755 MDR-TB lineage4.1.3 None
ERR9786207 Other lineage4.1 None
ERR9786147 Sensitive lineage4.1 None
ERR9786638 Sensitive lineage4.1.3 None
ERR9786772 Sensitive lineage4.1.3 None
SRR998660 Sensitive lineage4.1 None
ERR9901818 HR-TB lineage4.1.3 None
SRR7781511 MDR-TB lineage4.1.3 None
SRR16100243 HR-TB lineage4.1.3 None
SRR21690738 HR-TB lineage4.1.3 None
SRR7070478 Sensitive lineage4.1.3 None
SRR7131269 Sensitive lineage4.1 None
SRR998824 MDR-TB lineage4.1.3 None
SRR998809 MDR-TB lineage4.1.3 None
ERR2199984 Sensitive lineage4.1.3 None
SRR998668 Sensitive lineage4.1.3 None
SRR998702 Sensitive lineage4.1.3 None
SRR998778 Sensitive lineage4.1;lineage4.9 None
SRR998845 MDR-TB lineage4.1.3 None
ERR9786811 HR-TB lineage4.1.3 None
SRR998687 Other lineage4.1.3 None
ERR11049264 MDR-TB lineage4.1.3 None
ERR4872100 RR-TB lineage4.1.3 None
SRR5535723 MDR-TB lineage4.1.3 None
SRR6511614 MDR-TB lineage4.1.3 None
ERR3324369 Sensitive lineage4.1 None
ERR9786493 Other lineage4.1 None
SRR998701 Sensitive lineage4.1.3 None
ERR4423595 MDR-TB lineage4.1.3 None
ERR9899670 Sensitive lineage4.1.3 None
ERR751340 Sensitive lineage4.1 None
ERR9786134 Other lineage4.1 None
ERR4872136 MDR-TB lineage4.1.3 None
ERR502504 HR-TB lineage4.1.3;lineage6.2.1 None
SRR28860040 Sensitive lineage4.1 None
ERR9786222 Other lineage4.1 None
SRR21710726 HR-TB lineage4.1.3 None
SRR18913757 Sensitive lineage4.1.3 None
ERR10680050 MDR-TB lineage4.1 None
ERR10680116 MDR-TB lineage4.1.3 None
SRR998746 MDR-TB lineage4.1.3 None
ERR10680208 MDR-TB lineage4.1 None
ERR11049664 Sensitive lineage4.1 None
ERR4828982 MDR-TB lineage4.1.3 it
SRR23252658 MDR-TB lineage4.1.3 None
SRR21659818 HR-TB lineage4.1.3 None
SRR29055489 Other lineage4.1.3 None
ERR9786897 Other lineage4.1 None
ERR9786101 Sensitive lineage4.1 None
ERR13261903 RR-TB lineage4.1 None
SRR1577825 MDR-TB lineage4.1.3 None
SAMN02231179 MDR-TB lineage4.1.3 None
SRR998732 Sensitive lineage4.1.3 None
ERR2679245 Sensitive lineage4.1.3 None
ERR2679303 Sensitive lineage4.1 None
SRR998787 MDR-TB lineage4.1.3 None
ERR9786148 Sensitive lineage4.1.3 None
ERR11082111 Sensitive lineage4.1 None
ERR4829610 Sensitive lineage4.1.3 None
ERR10680011 MDR-TB lineage4.1 None
SRR1049966 Sensitive lineage4.1.3 None
ERR047890 MDR-TB lineage4.1.3 None
SRR1162482 MDR-TB lineage4.1.3 None
SRR1162775 MDR-TB lineage4.1.3 None
ERR4811451 Sensitive lineage4.1.3 None
ERR9786153 Sensitive lineage4.1 None
ERR9786344 Sensitive lineage4.1 None
ERR551067 HR-TB lineage4.1 None
ERR9786127 Sensitive lineage4.1 None
SRR1049968 Pre-XDR-TB lineage4.1.3 ml
SRR998685 Other lineage4.1.3 None
SRR998700 Sensitive lineage4.1.3 None
SRR998736 Sensitive lineage4.1.3 None
ERR10680158 MDR-TB lineage4.1.3 None
ERR9786932 Sensitive lineage4.1 None
SAMN02231107 Sensitive lineage4.1.3 None
SRR1049964 Other lineage4.1.3 None
SRR11444129 Sensitive lineage4.1.3 None
SRR1162478 Sensitive lineage4.1.3 None
SRR1162691 MDR-TB lineage4.1 None
ERR550633 Sensitive lineage4.1 de
ERR550698 HR-TB lineage4.1.3 de
ERR550713 Sensitive lineage4.1 de
ERR552858 HR-TB lineage4.1.3 de
ERR553332 HR-TB lineage4.1.3 de
ERR2516850 MDR-TB lineage4.1.3 gb
ERR2516380 Sensitive lineage4.1 be
ERR2516255 MDR-TB lineage4.1.3 be
ERR2516344 MDR-TB lineage4.1.3 be
ERR2516162 Sensitive lineage4.1.3 es
ERR2516542 MDR-TB lineage4.1.3 nl
ERR2516714 MDR-TB lineage4.1.3 nl
ERR2516657 Pre-XDR-TB lineage4.1.3 nl
ERR2516606 MDR-TB lineage4.1.3 nl
ERR2516489 MDR-TB lineage4.1.3 nl
ERR2510806 Sensitive lineage4.1 it
SRR6045622 Sensitive lineage4.1.3 gb
SRR11444304 HR-TB lineage4.1.3 None
SRR1162737 HR-TB lineage4.1 None
ERR11067754 MDR-TB lineage4.1.3 None
ERR4829008 MDR-TB lineage4.1.3 None
SRR21678374 Sensitive lineage4.1.3 None
SRR22048322 Sensitive lineage4.1 None
SAMN02231154 Pre-XDR-TB lineage4.1.3 ml
SAMN02231175 MDR-TB lineage4.1.3 ml
ERR9786482 Sensitive lineage4.1 None
ERR2679314 MDR-TB lineage4.1.3 None
ERR9786979 Sensitive lineage4.1.3 None
ERR9124956 HR-TB lineage4.1.3 None
SRR1103397 Sensitive lineage4.1.3 None
SAMN02231164 MDR-TB lineage4.1.3 None
SRR998754 MDR-TB lineage4.1.3 None
ERR028357 HR-TB lineage4.1.3 None
ERR028365 Sensitive lineage4.1.3 None
SRR998812 MDR-TB lineage4.1.3 None
ERR10680191 MDR-TB lineage4.1 None
SRR19317575 Sensitive lineage4.1 None
SRR28375412 Sensitive lineage4.1.2.1 None
SRR26112285 MDR-TB lineage4.1.3 None
SRR11444241 HR-TB lineage4.1.3 None
ERR4831163 Sensitive lineage4.1 de
ERR2679247 RR-TB lineage4.1.3 None
ERR4829403 Sensitive lineage4.1 None
ERR1679586 MDR-TB lineage4.1.3 ng
SRR998744 MDR-TB lineage4.1.3 None
SRR998851 MDR-TB lineage4.1.3 None
SRR21727727 Other lineage4.1.3 None
ERR4816401 Sensitive lineage4.1.3 None
ERR9786741 Sensitive lineage4.1.3 None
SRR1049976 MDR-TB lineage4.1.3 None
SRR1145855 Sensitive lineage4.1.3 None
ERR9786726 Sensitive lineage4.1 None
ERR9891996 Sensitive lineage4.1.3 None
SRR998792 MDR-TB lineage4.1.3 None
ERR550925 Sensitive lineage4.1.3 de
ERR551001 Sensitive lineage4.1.3 de
ERR551482 Sensitive lineage4.1.3 de
ERR552705 Sensitive lineage4.1.3 de
ERR550729 RR-TB lineage4.1 None
SAMEA2533673 HR-TB lineage4.1 None
SAMEA2533702 HR-TB lineage4.1.3 None
SAMEA2533765 Sensitive lineage4.1 None
SAMEA2534034 MDR-TB lineage4.1 None
SAMEA2534424 Sensitive lineage4.1 None
SAMEA2534452 Sensitive lineage4.1 None
ERR552132 Other lineage4.1 None
ERR552879 Sensitive lineage4.1 None
ERR553226 MDR-TB lineage4.1 None
ERR553347 Sensitive lineage4.1 None
SRR2100065 HR-TB lineage4.1.3 None
SRR2100180 Sensitive lineage4.1 None
SRR2100687 Sensitive lineage4.1 None
ERR4814637 Sensitive lineage4.1.3 gb
ERR4815976 Sensitive lineage4.1.3 gb
ERR4817571 Sensitive lineage4.1.3 gb
ERR4817581 HR-TB lineage4.1.3 gb
ERR4817587 Sensitive lineage4.1.3 gb
ERR4818644 Sensitive lineage4.1.3 gb
ERR4818816 MDR-TB lineage4.1.3 gb
ERR4819001 Sensitive lineage4.1.3 gb
ERR4821083 Sensitive lineage4.1.3 gb
ERR4821263 Sensitive lineage4.1.3 gb
ERR1952138 MDR-TB lineage4.1.3 ie
SRR6046222 Sensitive lineage4.1.3 gb
ERR2199985 Sensitive lineage4.1.3 de
ERR2200041 Sensitive lineage4.1.3 de
ERR2200071 HR-TB lineage4.1.3 de
SRR3724956 MDR-TB lineage4.1.3 None
SRR22248472 Sensitive lineage4.1.2.1 None
ERR13284399 MDR-TB lineage4.1.3 None
SRR998840 MDR-TB lineage4.1.3 None
ERR11049741 MDR-TB lineage4.1.3 None
ERR047885 MDR-TB lineage4.1.3 gb
ERR4815192 Sensitive lineage4.1.3 None
ERR4423523 MDR-TB lineage4.1.3 None
SRR29055892 MDR-TB lineage4.1.3 None
ERR10680193 MDR-TB lineage4.1.3 None
SAMN02231168 HR-TB lineage4.1 ml
SAMN02231146 Sensitive lineage4.1.3 ml
SAMN02231131 Sensitive lineage4.1.3 ml
SAMN02231181 MDR-TB lineage4.1.3 ml
SAMN02231190 MDR-TB lineage4.1.3 ml
SAMN02231166 MDR-TB lineage4.1 ml
SRR29126558 Sensitive lineage4.1 None
ERR9786616 HR-TB lineage4.1.3 None
ERR10680031 MDR-TB lineage4.1.3 None
ERR551568 MDR-TB lineage4.1 None
SRR21690992 Sensitive lineage4.1.3 None
SRR1162773 Pre-XDR-TB lineage4.1.3 None
ERR10680083 MDR-TB lineage4.1 None
ERR8774047 Sensitive lineage4.1 None
ERR4811382 Sensitive lineage4.1.3 None
ERR4811436 Sensitive lineage4.1.3 None
ERR4811443 Sensitive lineage4.1.3 None
SRR998704 Other lineage4.1.3 None
SRR998822 MDR-TB lineage4.1.3 None
SRR998847 MDR-TB lineage4.1.3 None
ERR4811386 Sensitive lineage4.1.3 None
ERR4811392 Sensitive lineage4.1.3 None
ERR4829435 MDR-TB lineage4.1.3 it
ERR4828894 MDR-TB lineage4.1.3 None
ERR4829980 MDR-TB lineage4.1.3 None
ERR4828916 MDR-TB lineage4.1.3 None
ERR4829570 Sensitive lineage4.1 it
ERR4829014 MDR-TB lineage4.1.3 it
ERR4829691 MDR-TB lineage4.1.3 it
SRR21675704 Other lineage4.1.3 None
SRR998774 Pre-XDR-TB lineage4.1.3 None
SRR998734 Sensitive lineage4.1.3 None
SRR998803 MDR-TB lineage4.1.3;lineage5.1.1 None
ERR11081472 Sensitive lineage4.1 None
ERR11082415 MDR-TB lineage4.1.3 None
ERR10680146 MDR-TB lineage4.1 None
ERR2679260 Sensitive lineage4.1 None
ERR4423599 HR-TB lineage4.1.3 None
ERR4818717 Sensitive lineage4.1.3 None
SRR2101824 Sensitive lineage4.1 None
ERR234198 Sensitive lineage4.1.3 None
ERR234201 HR-TB lineage4.1.3 gh
ERR552843 HR-TB lineage4.1.3 cg
ERR552432 MDR-TB lineage4.1.3 cg
ERR552431 MDR-TB lineage4.1.3 cg
ERR2679253 Sensitive lineage4.1 None
ERR2679262 MDR-TB lineage4.1.3 None
ERR2679315 Sensitive lineage4.1.3 None
ERR4816216 Sensitive lineage1.1.2;lineage4.1 gb
ERR4818165 Sensitive lineage4.1.3 gb
ERR4820469 Sensitive lineage4.1 gb
ERR4820549 Sensitive lineage4.1.3 gb
ERR4820741 Sensitive lineage4.1.3 gb
ERR4821377 HR-TB lineage4.1.3 gb
ERR4821575 Sensitive lineage4.1.3 gb
ERR4821800 Sensitive lineage4.1.3 gb
ERR2513998 HR-TB lineage4.1.3 gb
ERR2514497 Sensitive lineage4.1.3 gb
ERR2514564 HR-TB lineage4.1.3 gb
SRR3732646 MDR-TB lineage4.1.3 None
SRR998591 Other lineage4.1.3 None
SRR998669 Sensitive lineage4.1.3 None
SRR998714 Sensitive lineage4.1.3 None
SRR998747 MDR-TB lineage4.1.3 None
SRR998771 MDR-TB lineage4.1.3 None
ERR13284737 MDR-TB lineage4.1.3 None
ERR11082803 Sensitive lineage4.1.3 None
SRR998821 MDR-TB lineage4.1.3 None
ERR10680154 MDR-TB lineage4.1 None
ERR9786307 Sensitive lineage4.1.1.1;lineage4.1.3 None
ERR9786400 Sensitive lineage4.1 None
ERR9786596 Sensitive lineage2.2.1;lineage4.1 None
ERR9786626 Sensitive lineage4.1 None
ERR9786707 Sensitive lineage4.1 None
SAMN02231126 Other lineage4.1.3 None
SRR026443 MDR-TB lineage4.1.3 None
ERR551569 MDR-TB lineage4.1 None
SRR1577821 MDR-TB lineage4.1.3 None
SRR26112823 HR-TB lineage4.1 None
ERR10680129 MDR-TB lineage4.1 None