Rv2752c - c.-370A>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
1 RR-TB
20 HR-TB
4 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| 10 | |
| lineage4.6.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.8 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.1.1.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 5 |
| lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage4 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29097037 | Other | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR176549 | Other | lineage4.3.4.2 | None | SRR26159043 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR6358755 | Other | lineage4.6.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4817893 | Other | lineage4.8 | None | SRR1165699 | Other | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR25827682 | Other | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR12015083 | Other | lineage4.8 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | SRR7496509 | Other | None | ERR176751 | Other | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786671 | Other | None | SRR6045555 | Other | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR4407463 | HR-TB | None | ERR4819241 | Other | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4800341 | Other | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR29051077 | Other | lineage4.9 | None | ERR9786440 | Other | lineage4.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR12416824 | HR-TB | None | ERR9117721 | HR-TB | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | SRR29097066 | Sensitive | lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None |
|---|
