ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR553226
|
MDR-TB
|
lineage4.1
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR9786222
|
Other
|
lineage4.1
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
ERR10680208
|
MDR-TB
|
lineage4.1
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR123944
|
Sensitive
|
lineage4.1
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR3324345
|
RR-TB
|
lineage4.1
|
None
|
ERR9786482
|
Sensitive
|
lineage4.1
|
None
|
ERR10680011
|
MDR-TB
|
lineage4.1
|
None
|
SRR3675390
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR29126878
|
Sensitive
|
lineage4.1
|
None
|
ERR502889
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR9786127
|
Sensitive
|
lineage4.1
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR553347
|
Sensitive
|
lineage4.1
|
None
|
ERR9786932
|
Sensitive
|
lineage4.1
|
None
|
ERR13261903
|
RR-TB
|
lineage4.1
|
None
|
ERR2679260
|
Sensitive
|
lineage4.1
|
None
|
ERR9786726
|
Sensitive
|
lineage4.1
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
SRR1162737
|
HR-TB
|
lineage4.1
|
None
|
ERR3439432
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
SRR998632
|
Sensitive
|
lineage4.1
|
None
|
ERR8774079
|
Sensitive
|
lineage4.1
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786801
|
Sensitive
|
lineage4.1
|
None
|
SRR29341565
|
Sensitive
|
lineage4.1
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR998777
|
Sensitive
|
lineage4.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR8773495
|
Sensitive
|
lineage4.1
|
None
|
ERR9786251
|
Sensitive
|
lineage4.1
|
None
|
ERR9786457
|
Sensitive
|
lineage4.1
|
None
|
ERR4407533
|
Sensitive
|
lineage4.1
|
None
|
SAMEA2534424
|
Sensitive
|
lineage4.1
|
None
|
SRR3725714
|
MDR-TB
|
lineage4.1
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR9786310
|
Sensitive
|
lineage4.1
|
None
|
ERR9786647
|
Other
|
lineage4.1
|
None
|
ERR552160_ERR552159
|
Other
|
lineage4.1
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR067681
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|
SRR29055974
|
Sensitive
|
lineage4.1
|
None
|
ERR4797285
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR1103376
|
HR-TB
|
lineage4.1
|
None
|
SRR1103591
|
MDR-TB
|
lineage4.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR10680189
|
MDR-TB
|
lineage4.1
|
None
|
SRR18911981
|
Sensitive
|
lineage4.1
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786401
|
Other
|
lineage4.1
|
None
|
ERR10796548
|
Sensitive
|
lineage4.1
|
None
|
SRR2100687
|
Sensitive
|
lineage4.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR9786789
|
Sensitive
|
lineage4.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR9786475
|
Sensitive
|
lineage4.1
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR2679288
|
Sensitive
|
lineage4.1
|
None
|
SRR998690
|
Sensitive
|
lineage4.1
|
None
|
ERR8774045
|
Sensitive
|
lineage4.1
|
None
|
ERR9786849
|
Sensitive
|
lineage4.1
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786947
|
Sensitive
|
lineage4.1
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR552159
|
Sensitive
|
lineage4.1
|
None
|
ERR9786572
|
Sensitive
|
lineage4.1
|
None
|
ERR9786487
|
Other
|
lineage4.1
|
None
|
ERR552116
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231138
|
Sensitive
|
lineage4.1
|
None
|
SRR998633
|
Sensitive
|
lineage4.1
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
SRR13180418
|
Other
|
lineage4.1
|
None
|
ERR9786835
|
Other
|
lineage4.1
|
None
|
SRR998688
|
Sensitive
|
lineage4.1.3
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
ERR11044595
|
Sensitive
|
lineage4.1
|
None
|
ERR9786332
|
Other
|
lineage4.1
|
None
|
ERR11043903
|
MDR-TB
|
lineage4.1
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
ERR1367610
|
Sensitive
|
lineage4.1
|
None
|
ERR9786915
|
HR-TB
|
lineage4.1
|
None
|
SRR998634
|
Sensitive
|
lineage4.1
|
None
|
SRR998635
|
Sensitive
|
lineage4.1
|
None
|
ERR2446330
|
Sensitive
|
lineage4.1
|
nl
|
SRR1049959
|
Sensitive
|
lineage4.1;lineage6.3.1
|
None
|
ERR751340
|
Sensitive
|
lineage4.1
|
None
|
SAMEA2534034
|
MDR-TB
|
lineage4.1
|
None
|
ERR9786134
|
Other
|
lineage4.1
|
None
|
SRR1049961
|
Other
|
La1.6;lineage4.1
|
None
|
SRR7131128
|
Sensitive
|
lineage4.1
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
ERR11049664
|
Sensitive
|
lineage4.1
|
None
|
ERR4815502
|
Other
|
lineage4.1
|
None
|
ERR2516380
|
Sensitive
|
lineage4.1
|
be
|
ERR2679303
|
Sensitive
|
lineage4.1
|
None
|
ERR11082111
|
Sensitive
|
lineage4.1
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR8774047
|
Sensitive
|
lineage4.1
|
None
|
ERR10680191
|
MDR-TB
|
lineage4.1
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR2510806
|
Sensitive
|
lineage4.1
|
it
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
SRR29126717
|
Sensitive
|
lineage4.1
|
None
|
ERR552132
|
Other
|
lineage4.1
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR13284711
|
MDR-TB
|
lineage4.1
|
None
|
ERR11081472
|
Sensitive
|
lineage4.1
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786400
|
Sensitive
|
lineage4.1
|
None
|
SRR26112823
|
HR-TB
|
lineage4.1
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR10680129
|
MDR-TB
|
lineage4.1
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4829403
|
Sensitive
|
lineage4.1
|
None
|
SRR21689444
|
Sensitive
|
lineage4.1
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR998691
|
Sensitive
|
lineage4.1
|
None
|
ERR3275268
|
Sensitive
|
lineage4.1
|
nl
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR2679253
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231168
|
HR-TB
|
lineage4.1
|
ml
|
ERR11068224
|
Sensitive
|
lineage4.1
|
None
|
SRR1049975
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR10679999
|
MDR-TB
|
lineage4.1
|
None
|
ERR9786414
|
Sensitive
|
lineage4.1
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
ERR4814472
|
Other
|
lineage4.1
|
None
|
ERR9786157
|
Sensitive
|
lineage4.1
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR552160
|
Sensitive
|
lineage4.1
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
SRR1162481
|
MDR-TB
|
lineage4.1
|
None
|
ERR9786237
|
Sensitive
|
lineage4.1
|
None
|
SAMEA2533765
|
Sensitive
|
lineage4.1
|
None
|
ERR4829570
|
Sensitive
|
lineage4.1
|
it
|
SRR3675550
|
RR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
ERR552117
|
Sensitive
|
lineage4.1
|
None
|
SRR29126646
|
Other
|
lineage4.1
|
None
|
ERR2517391
|
Sensitive
|
lineage4.1
|
nl
|
ERR9787220
|
Other
|
lineage4.1;lineage6.1.3
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR26112351
|
HR-TB
|
lineage4.1
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
ERR551193
|
Other
|
lineage4.1
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR9117834
|
Sensitive
|
lineage4.1
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786379
|
Other
|
lineage4.1
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR4798406
|
MDR-TB
|
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
|
None
|
ERR13292384
|
Sensitive
|
lineage4.1
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR10680142
|
RR-TB
|
lineage4.1
|
None
|
ERR8774387
|
Sensitive
|
lineage4.1
|
None
|
ERR9786147
|
Sensitive
|
lineage4.1
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR9786766
|
Sensitive
|
lineage4.1
|
None
|
ERR9786862
|
Sensitive
|
lineage4.1
|
None
|
SRR7131269
|
Sensitive
|
lineage4.1
|
None
|
SRR2101824
|
Sensitive
|
lineage4.1
|
None
|
SRR998778
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR3324369
|
Sensitive
|
lineage4.1
|
None
|
ERR9786493
|
Other
|
lineage4.1
|
None
|
SRR21676520
|
Other
|
lineage4.1
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4799620
|
HR-TB
|
lineage3.1.2.1
|
in
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
ERR9786897
|
Other
|
lineage4.1
|
None
|
ERR551568
|
MDR-TB
|
lineage4.1
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR10680083
|
MDR-TB
|
lineage4.1
|
None
|
SRR19317575
|
Sensitive
|
lineage4.1
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29055652
|
Sensitive
|
lineage4.1
|
None
|
ERR9786153
|
Sensitive
|
lineage4.1
|
None
|
ERR9786344
|
Sensitive
|
lineage4.1
|
None
|
SRR29053158
|
Sensitive
|
lineage4.1
|
None
|
ERR4188322
|
Other
|
lineage4.6.4;lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
ERR4831163
|
Sensitive
|
lineage4.1
|
de
|
SRR1162691
|
MDR-TB
|
lineage4.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
ERR10680154
|
MDR-TB
|
lineage4.1
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR9786596
|
Sensitive
|
lineage2.2.1;lineage4.1
|
None
|
ERR9786626
|
Sensitive
|
lineage4.1
|
None
|
ERR551569
|
MDR-TB
|
lineage4.1
|
None
|
SRR3675586
|
Other
|
M.canetti;lineage4.6.4;lineage4.9
|
None
|
ERR10680100
|
MDR-TB
|
lineage4.1
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR9786298
|
Sensitive
|
lineage4.1
|
None
|
SRR1162472
|
HR-TB
|
lineage4.1
|
None
|
ERR8774156
|
Sensitive
|
lineage4.1
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR8774081
|
Sensitive
|
lineage4.1
|
None
|
SRR26112486
|
Sensitive
|
lineage4.1
|
None
|
ERR8774158
|
Sensitive
|
lineage4.1
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR230062
|
Sensitive
|
lineage4.1
|
None
|
ERR550633
|
Sensitive
|
lineage4.1
|
de
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR11082079
|
Sensitive
|
lineage4.1
|
None
|
SAMN02231166
|
MDR-TB
|
lineage4.1
|
ml
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786441
|
Other
|
lineage4.1
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR551192
|
Sensitive
|
lineage4.1
|
None
|
SRR1049962
|
Sensitive
|
lineage4.1.3;lineage6.3.1
|
None
|
ERR5311079
|
Other
|
La1.6;La3;M.canetti;lineage4.2;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR550713
|
Sensitive
|
lineage4.1
|
de
|
ERR9786397
|
Other
|
lineage4.1
|
None
|
SRR29126558
|
Sensitive
|
lineage4.1
|
None
|
ERR9117737
|
Sensitive
|
lineage4.1
|
None
|
SRR998663
|
Sensitive
|
lineage4.1
|
None
|
ERR2679265
|
Sensitive
|
lineage4.1
|
None
|
SRR998689
|
HR-TB
|
lineage4.1.3
|
None
|
ERR3324356
|
Other
|
lineage4.1
|
None
|
ERR5311103
|
RR-TB
|
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9
|
None
|
SRR2100180
|
Sensitive
|
lineage4.1
|
None
|
ERR551192_ERR551193
|
Other
|
lineage4.1
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786792
|
Sensitive
|
lineage4.1
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR8774049
|
Sensitive
|
lineage4.1
|
None
|
ERR2679244
|
Sensitive
|
lineage4.1
|
None
|
SAMEA2534452
|
Sensitive
|
lineage4.1
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR551569_ERR551568
|
MDR-TB
|
lineage4.1
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
SRR6046482
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR5311091
|
Other
|
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
ERR9786217
|
Other
|
lineage4.1
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR3324332
|
Sensitive
|
lineage4.1
|
None
|
ERR9786352
|
Sensitive
|
lineage4.1
|
None
|
ERR552879
|
Sensitive
|
lineage4.1
|
None
|
SRR1049971
|
Sensitive
|
lineage4.1
|
None
|
ERR552117_ERR552116
|
Sensitive
|
lineage4.1
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR8774082
|
Sensitive
|
lineage4.1
|
None
|
SRR19325549
|
Other
|
lineage4.1
|
None
|
ERR9786691
|
Other
|
lineage4.1
|
None
|
ERR4816466
|
HR-TB
|
lineage4.9
|
None
|
ERR9786303
|
Sensitive
|
lineage4.1
|
None
|
ERR9786506
|
Sensitive
|
lineage2.2.1;lineage4.1.2.1;lineage4.7
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR3806607
|
Other
|
lineage4.1
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR9786207
|
Other
|
lineage4.1
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR6046824
|
MDR-TB
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
|
None
|