Rv0006 - c.2355C>G
Drug resistance types
117 Sensitive
7 RR-TB
31 HR-TB
32 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 166 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage4.1;lineage6.3.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.9 | 15 |
| La1.7;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| 6 | |
| lineage2.1 | 2 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.3 | 3 |
| La3;lineage2 | 1 |
| lineage2.1;lineage4.9 | 9 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.3;lineage6.3.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 3 |
| lineage4.1.1.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.1;lineage6.1.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage4.9;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.1.2.1;lineage4.7 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage3.1.2.1 | 1 |
| La1.6;lineage4.1 | 1 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La3;lineage4.9 | 2 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3 | 1 |
| lineage4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 271 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2446330 | Sensitive | lineage4.1 | nl | ERR553226 | MDR-TB | lineage4.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR1049959 | Sensitive | lineage4.1;lineage6.3.1 | None | ERR9786134 | Other | lineage4.1 | None | ERR9786222 | Other | lineage4.1 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR11049664 | Sensitive | lineage4.1 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR9786344 | Sensitive | lineage4.1 | None | ERR552132 | Other | lineage4.1 | None | ERR9786127 | Sensitive | lineage4.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1162737 | HR-TB | lineage4.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR9786298 | Sensitive | lineage4.1 | None | ERR9786801 | Sensitive | lineage4.1 | None | SRR21689444 | Sensitive | lineage4.1 | None | ERR552160_ERR552159 | Other | lineage4.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18213713 | HR-TB | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR29055974 | Sensitive | lineage4.1 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR11068224 | Sensitive | lineage4.1 | None | SRR1049975 | MDR-TB | lineage4.1.3 | None | SRR1103376 | HR-TB | lineage4.1 | None | SRR1103591 | MDR-TB | lineage4.1 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR10680189 | MDR-TB | lineage4.1 | None | ERR9786441 | Other | lineage4.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786157 | Sensitive | lineage4.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR551192 | Sensitive | lineage4.1 | None | ERR9786401 | Other | lineage4.1 | None | ERR552160 | Sensitive | lineage4.1 | None | ERR10796548 | Sensitive | lineage4.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1049962 | Sensitive | lineage4.1.3;lineage6.3.1 | None | ERR9786397 | Other | lineage4.1 | None | ERR9786475 | Sensitive | lineage4.1 | None | ERR4829570 | Sensitive | lineage4.1 | it | SRR29126558 | Sensitive | lineage4.1 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9117737 | Sensitive | lineage4.1 | None | SRR998689 | HR-TB | lineage4.1.3 | None | ERR3324356 | Other | lineage4.1 | None | SRR29126646 | Other | lineage4.1 | None | ERR2517391 | Sensitive | lineage4.1 | nl | ERR551192_ERR551193 | Other | lineage4.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR998633 | Sensitive | lineage4.1 | None | ERR161037 | Other | lineage4.9 | None | ERR3324332 | Sensitive | lineage4.1 | None | ERR552879 | Sensitive | lineage4.1 | None | SRR1049971 | Sensitive | lineage4.1 | None | ERR552117_ERR552116 | Sensitive | lineage4.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR9786379 | Other | lineage4.1 | None | SRR3675236 | Other | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR8774082 | Sensitive | lineage4.1 | None | SRR19325549 | Other | lineage4.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR9786691 | Other | lineage4.1 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR9786207 | Other | lineage4.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9786766 | Sensitive | lineage4.1 | None | ERR9786862 | Sensitive | lineage4.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR11082111 | Sensitive | lineage4.1 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29126878 | Sensitive | lineage4.1 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR29055652 | Sensitive | lineage4.1 | None | SRR29126717 | Sensitive | lineage4.1 | None | SRR29053158 | Sensitive | lineage4.1 | None | ERR13261903 | RR-TB | lineage4.1 | None | ERR2679260 | Sensitive | lineage4.1 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR9786726 | Sensitive | lineage4.1 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1162691 | MDR-TB | lineage4.1 | None | ERR10680154 | MDR-TB | lineage4.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR551569 | MDR-TB | lineage4.1 | None | ERR8774156 | Sensitive | lineage4.1 | None | SRR1173778 | Other | lineage4.9 | None | ERR8774081 | Sensitive | lineage4.1 | None | SRR26112486 | Sensitive | lineage4.1 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR11082079 | Sensitive | lineage4.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR2100687 | Sensitive | lineage4.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR550713 | Sensitive | lineage4.1 | de | ERR2679288 | Sensitive | lineage4.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR998663 | Sensitive | lineage4.1 | None | SRR998690 | Sensitive | lineage4.1 | None | ERR552117 | Sensitive | lineage4.1 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | ERR9786947 | Sensitive | lineage4.1 | None | SRR2100180 | Sensitive | lineage4.1 | None | ERR9787220 | Other | lineage4.1;lineage6.1.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR552159 | Sensitive | lineage4.1 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR26112351 | HR-TB | lineage4.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR9786487 | Other | lineage4.1 | None | SAMEA2534452 | Sensitive | lineage4.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR551193 | Other | lineage4.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR9786835 | Other | lineage4.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR11044595 | Sensitive | lineage4.1 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR9786332 | Other | lineage4.1 | None | ERR11043903 | MDR-TB | lineage4.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR13292384 | Sensitive | lineage4.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR9786303 | Sensitive | lineage4.1 | None | ERR9786506 | Sensitive | lineage2.2.1;lineage4.1.2.1;lineage4.7 | None | SRR28119777 | Other | lineage4.9 | None | ERR3806607 | Other | lineage4.1 | None | ERR1367610 | Sensitive | lineage4.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR10680142 | RR-TB | lineage4.1 | None | ERR8774387 | Sensitive | lineage4.1 | None | ERR9786147 | Sensitive | lineage4.1 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR3324369 | Sensitive | lineage4.1 | None | ERR9786493 | Other | lineage4.1 | None | SRR21676520 | Other | lineage4.1 | None | ERR751340 | Sensitive | lineage4.1 | None | SAMEA2534034 | MDR-TB | lineage4.1 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4799620 | HR-TB | lineage3.1.2.1 | in | SRR1049961 | Other | La1.6;lineage4.1 | None | SRR7131128 | Sensitive | lineage4.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR10680208 | MDR-TB | lineage4.1 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | ERR4815502 | Other | lineage4.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR123944 | Sensitive | lineage4.1 | None | ERR9786897 | Other | lineage4.1 | None | ERR2516380 | Sensitive | lineage4.1 | be | ERR2679303 | Sensitive | lineage4.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR9786482 | Sensitive | lineage4.1 | None | ERR10680011 | MDR-TB | lineage4.1 | None | ERR551568 | MDR-TB | lineage4.1 | None | ERR10680083 | MDR-TB | lineage4.1 | None | ERR8774047 | Sensitive | lineage4.1 | None | ERR10680191 | MDR-TB | lineage4.1 | None | SRR19317575 | Sensitive | lineage4.1 | None | SRR28119805 | Other | lineage4.9 | None | ERR2510806 | Sensitive | lineage4.1 | it | ERR9786153 | Sensitive | lineage4.1 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR13284711 | MDR-TB | lineage4.1 | None | ERR553347 | Sensitive | lineage4.1 | None | ERR9786932 | Sensitive | lineage4.1 | None | ERR11081472 | Sensitive | lineage4.1 | None | ERR4831163 | Sensitive | lineage4.1 | de | SRR1184372 | MDR-TB | None | ERR9786440 | Other | lineage4.1 | None | SRR3675572 | Other | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR9786400 | Sensitive | lineage4.1 | None | ERR9786596 | Sensitive | lineage2.2.1;lineage4.1 | None | ERR9786626 | Sensitive | lineage4.1 | None | ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR26112823 | HR-TB | lineage4.1 | None | SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR10680129 | MDR-TB | lineage4.1 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR998632 | Sensitive | lineage4.1 | None | ERR4829403 | Sensitive | lineage4.1 | None | ERR10680100 | MDR-TB | lineage4.1 | None | ERR8774079 | Sensitive | lineage4.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR29341565 | Sensitive | lineage4.1 | None | SRR1162472 | HR-TB | lineage4.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR998777 | Sensitive | lineage4.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR8773495 | Sensitive | lineage4.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR9786251 | Sensitive | lineage4.1 | None | ERR9786457 | Sensitive | lineage4.1 | None | ERR4407533 | Sensitive | lineage4.1 | None | SAMEA2534424 | Sensitive | lineage4.1 | None | SRR3725714 | MDR-TB | lineage4.1 | None | SRR998691 | Sensitive | lineage4.1 | None | ERR3275268 | Sensitive | lineage4.1 | nl | ERR8774158 | Sensitive | lineage4.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR9786310 | Sensitive | lineage4.1 | None | ERR9786647 | Other | lineage4.1 | None | ERR230062 | Sensitive | lineage4.1 | None | ERR550633 | Sensitive | lineage4.1 | de | ERR2679253 | Sensitive | lineage4.1 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SAMN02231168 | HR-TB | lineage4.1 | ml | ERR10679999 | MDR-TB | lineage4.1 | None | ERR9786414 | Sensitive | lineage4.1 | None | SAMN02231166 | MDR-TB | lineage4.1 | ml | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR1063896 | Sensitive | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814472 | Other | lineage4.1 | None | SRR18911981 | Sensitive | lineage4.1 | None | SRR1162481 | MDR-TB | lineage4.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR9786237 | Sensitive | lineage4.1 | None | ERR9786789 | Sensitive | lineage4.1 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SAMEA2533765 | Sensitive | lineage4.1 | None | ERR2679265 | Sensitive | lineage4.1 | None | ERR8774045 | Sensitive | lineage4.1 | None | ERR9786849 | Sensitive | lineage4.1 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786572 | Sensitive | lineage4.1 | None | ERR9786792 | Sensitive | lineage4.1 | None | ERR8774049 | Sensitive | lineage4.1 | None | ERR2679244 | Sensitive | lineage4.1 | None | ERR552116 | Sensitive | lineage4.1 | None | ERR551569_ERR551568 | MDR-TB | lineage4.1 | None | SAMN02231138 | Sensitive | lineage4.1 | None | ERR9786217 | Other | lineage4.1 | None | SRR13180418 | Other | lineage4.1 | None | ERR9786352 | Sensitive | lineage4.1 | None | ERR9117834 | Sensitive | lineage4.1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR998688 | Sensitive | lineage4.1.3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172817 | Other | La3 | None | ERR9786915 | HR-TB | lineage4.1 | None | SRR7131269 | Sensitive | lineage4.1 | None | SRR2101824 | Sensitive | lineage4.1 | None | SRR998634 | Sensitive | lineage4.1 | None | SRR998635 | Sensitive | lineage4.1 | None | SRR998778 | Sensitive | lineage4.1;lineage4.9 | None |
|---|
