Rv3262 - c.1209T>C
Drug resistance types
16 Sensitive
2 RR-TB
121 HR-TB
19 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 7 |
| lineage4 | 20 |
| 150 | |
| lineage3.1 | 9 |
| lineage4.1.2.1 | 3 |
| lineage4.3.3 | 4 |
| lineage4.9 | 10 |
| lineage2.2 | 5 |
| lineage4.6.2.2 | 2 |
| La2 | 1 |
| La1 | 1 |
| lineage3.1.2 | 1 |
| lineage3 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.1.3 | 1 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage2 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 1 |
| lineage4.8;La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 229 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819781 | Other | lineage2.2.1 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SAMN02414990 | MDR-TB | lineage3.1 | se | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693254 | Other | None | ERR2693230 | Other | None | SRR6045526 | HR-TB | None | ERR2693257 | Other | None | ERR4822328 | RR-TB | lineage4.1.2.1 | None | SRR6045519 | HR-TB | None | ERR4821314 | Other | lineage4.3.3 | None | SRR6046066 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046046 | Other | None | SRR6045327 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6325444 | HR-TB | None | ERR4830353 | Other | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR5311090 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | SRR7535086 | Other | None | ERR5311081 | HR-TB | None | ERR4818106 | Sensitive | lineage4.3.3 | gb | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR323053 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR323055 | HR-TB | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR11043545 | MDR-TB | lineage3.1 | None | ERR1063896 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR1063883 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283024 | Other | None | ERR3283017 | HR-TB | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797014 | Other | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800341 | Other | lineage3 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR5336148 | Other | None | ERR5979441 | MDR-TB | lineage3.1 | None | ERR5979456 | Sensitive | lineage3.1 | None | ERR6358837 | HR-TB | None | ERR6358979 | Other | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786671 | Other | None | ERR9634265 | Sensitive | None | SRR1169306 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1103397 | Sensitive | lineage4.1.3 | None | SRR1162758 | MDR-TB | lineage3.1 | None | SRR1165373 | MDR-TB | lineage3.1 | None | SRR1166817 | MDR-TB | lineage3.1 | None | SRR1167069 | MDR-TB | lineage3.1 | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1173484 | Other | lineage4 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1184380 | HR-TB | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13861304 | Other | lineage4.9 | None | SRR15368973 | Other | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | ERR11081912 | MDR-TB | lineage3.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675236 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675501 | HR-TB | None | ERR2229542 | Other | lineage4.8 | None | ERR176751 | HR-TB | None | SRR3675311 | Other | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | SRR3675572 | Other | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR502912 | Other | lineage2.2.1 | None | SRR5007188 | Other | lineage4 | None | ERR4816656 | HR-TB | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | SRR5341418 | Other | None |
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