lineage | Count |
---|---|
lineage4 | 3 |
55 | |
lineage2.2.1 | 10 |
lineage3 | 1 |
lineage2.2 | 1 |
lineage4.9 | 2 |
lineage3.1 | 1 |
lineage2.2.2 | 1 |
La3 | 1 |
lineage4.8 | 2 |
lineage4.4.2 | 1 |
lineage4.1 | 1 |
lineage4.7 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 81 |
ID | Drug resistance | Lineage | Country iso2 | ERR4819280 | Sensitive | lineage4 | None | ERR234659 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4820979 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045033 | HR-TB | None | SRR6045526 | HR-TB | None | SRR1710075 | Sensitive | lineage2.2.1 | cn | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR8651575 | Sensitive | lineage2.2.1 | cn | ERR294248 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323043 | HR-TB | None | ERR502532 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323041 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR5336148 | Other | None | ERR6358837 | HR-TB | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736867 | HR-TB | None | ERR736839 | Other | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | ERR736874 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169306 | Other | None | SRR1169194 | Other | None | SRR1169249 | Other | La3 | None | SRR1173363 | HR-TB | None | SRR1172951 | Other | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR15315995 | Sensitive | lineage2.2.1 | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR16088227 | Sensitive | lineage4.8 | None | SRR21031740 | Sensitive | lineage4.4.2 | None | SRR19304036 | HR-TB | None | ERR553165 | HR-TB | lineage4.1 | None | SRR22250219 | Sensitive | lineage4.7 | None | SRR28239589 | Sensitive | lineage4.8 | None | SRR6280337 | Sensitive | lineage2.2.1 | cn | ERR1035239 | HR-TB | None | SRR6280261 | Sensitive | lineage2.2.1 | cn | SRR6280260 | Sensitive | lineage2.2.1 | cn | SRR6280154 | Sensitive | lineage2.2.1 | cn | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | ERR212001 | HR-TB | None | ERR176751 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR212033 | HR-TB | None | SRR3742665 | HR-TB | None | SRR3675574 | HR-TB | None |
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