lineage | Count |
---|---|
84 | |
lineage2.2.1 | 2 |
lineage4.9 | 3 |
lineage4 | 1 |
lineage2.2 | 2 |
La2 | 1 |
lineage4.7 | 1 |
lineage4.8 | 1 |
lineage4.3.2 | 1 |
lineage4.6.2.2 | 1 |
lineage4.1 | 1 |
lineage2.2.2 | 1 |
lineage3;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 | ERR234659 | HR-TB | None | SRR5341302 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2693257 | Other | None | SRR5341333 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | SRR7496509 | Other | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502524 | HR-TB | La2 | None | ERR5311081 | HR-TB | None | SRR6325447 | HR-TB | None | ERR323036 | HR-TB | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323043 | HR-TB | None | SRR7496523 | Other | lineage4.7 | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | SRR7496517 | Other | None | SRR7535086 | Other | None | ERR1034652 | Other | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR108424 | Sensitive | lineage4.8 | None | ERR3283017 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797044 | Other | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4188350 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811105 | HR-TB | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR8976043 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | SRR1172817 | HR-TB | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR1172728 | MDR-TB | None | SRR1169194 | Other | None | SRR1173629 | Other | None | SRR1172951 | Other | None | SRR1172857 | MDR-TB | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | ERR8025719 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675486 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675545 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None |
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