lineage | Count |
---|---|
lineage4.9;lineage4.3.4.2 | 1 |
lineage2.2.1 | 2 |
76 | |
lineage4.3 | 1 |
lineage4.1.2.1 | 1 |
lineage4 | 7 |
lineage4.9 | 5 |
lineage4.2.1.1 | 1 |
lineage2.2 | 1 |
lineage6.1.3 | 2 |
La3 | 1 |
lineage2.2.1.1 | 1 |
lineage4.3.3 | 1 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 | ERR4813298 | HR-TB | lineage4.9;lineage4.3.4.2 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176751 | HR-TB | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR2693257 | Other | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | ERR212121 | HR-TB | None | SRR3742665 | HR-TB | None | ERR1035162 | Other | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR1035138 | MDR-TB | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR5341418 | Other | None | ERR2693231 | Other | None | SRR5535933 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046362 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046824 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046492 | Other | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502889 | Other | None | ERR3797048 | HR-TB | None | ERR5311090 | HR-TB | None | ERR067681 | HR-TB | None | ERR133986 | HR-TB | None | ERR294266 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1035157 | Other | lineage4.9 | None | ERR3439432 | Other | None | ERR4798406 | HR-TB | None | ERR3801612 | Other | lineage6.1.3 | None | ERR403298 | HR-TB | lineage4 | None | ERR4811022 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR9787258 | Other | lineage6.1.3 | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172951 | Other | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173118 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1184380 | HR-TB | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None |
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