lineage | Count |
---|---|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
lineage4.1.1.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
M.canetti;lineage4.6.4;lineage4.9 | 1 |
lineage2.1;lineage4.9 | 4 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 2 |
lineage4.1.2.1 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
lineage2.1;lineage6.3 | 1 |
lineage2.2 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
2 | |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
lineage4.1.3 | 2 |
lineage2.2.1 | 2 |
lineage4.6.1.1 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
lineage4.7 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.2 | 1 |
spoligotype | Count |
---|---|
None | 32 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
ERR11252490 | Sensitive | lineage4.1.1.3 | None |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
SRR6045242 | Other | lineage2.1;lineage4.9 | None |
SRR6046540 | Other | lineage2.1;lineage4.9 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR11465597 | Sensitive | lineage4.1.2.1 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
SRR19303884 | Other | lineage2.1;lineage6.3 | None |
ERR4816585 | Other | lineage2.2 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
SRR7535086 | Other | None | |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
ERR9786611 | HR-TB | lineage4.1.3 | None |
ERR4814352 | Other | lineage2.2.1 | None |
ERR4819781 | Other | lineage2.2.1 | None |
ERR6358755 | Other | lineage4.6.1.1 | None |
ERR3283019 | Other | lineage2.1;lineage4.9 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR4819932 | Other | lineage4.7 | None |
SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
ERR1035157 | Other | lineage4.9 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
ERR3804169 | HR-TB | lineage4.1.3 | None |
SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
SRR7496509 | Other | None | |
ERR736867 | Other | lineage2.1;lineage4.9 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |