Rv2780 - c.951G>C
Drug resistance types
3 Sensitive
1 RR-TB
25 HR-TB
6 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 3 |
| lineage3.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 15 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage2.1 | 2 |
| 7 | |
| lineage4.9;lineage6.3 | 4 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| La3;lineage2 | 1 |
| La3;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage2.2.1 | 2 |
| lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La3;lineage1.1.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 71 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR11067297 | Sensitive | lineage3.1.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR9117709 | Other | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR25827682 | Other | None | ERR234659 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR137286 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675236 | Other | None | ERR4800341 | Other | lineage3 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6046485 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR28119752 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1184372 | MDR-TB | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR3283042 | Other | lineage4.9 | None | SRR18213713 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None |
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