lineage | Count |
---|---|
lineage2.2.1 | 2 |
33 | |
lineage4.3 | 1 |
lineage4.3.4 | 1 |
lineage4 | 9 |
lineage4.8 | 1 |
lineage2.2 | 2 |
lineage4.4.1.1 | 3 |
La1.8.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.9 | 4 |
lineage4.7 | 1 |
La2 | 1 |
lineage4.1.3 | 2 |
lineage2 | 1 |
lineage3.1.2 | 1 |
lineage4.6.1.1 | 2 |
lineage4.3.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.5 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR4815604 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4817060 | RR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4816585 | Other | lineage2.2 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4818021 | Other | La1.8.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR5007188 | Other | lineage4 | None | ERR4818615 | Other | None | SRR6046066 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341470 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR6045450 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6046305 | Other | lineage4.9 | None | SRR6789626 | Other | None | SRR6046540 | HR-TB | None | SRR6982401 | HR-TB | lineage4.4.1.1 | None | SRR7535086 | Other | None | ERR502524 | HR-TB | La2 | None | SRR7496517 | Other | None | ERR323039 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323053 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283027 | HR-TB | None | ERR4797264 | Sensitive | None | ERR3797058 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3797069 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797474 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR5336148 | Other | None | ERR9117709 | HR-TB | None | ERR736865 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR987722 | HR-TB | None | ERR9786843 | Other | None | SRR1167384 | Other | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1169194 | Other | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1169306 | Other | None | SRR1172310 | HR-TB | None | SRR1174897 | HR-TB | None | SRR2101654 | HR-TB | lineage4.4.1.1 | None | SRR19303884 | HR-TB | None | ERR11067707 | Sensitive | lineage3 | None |
---|