Rv0676c - c.2445G>C
Drug resistance types
6 Sensitive
1 RR-TB
16 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
28 Other
lineage Counts
| lineage | Count |
|---|---|
| 7 | |
| lineage4.9;lineage6.3 | 8 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 12 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage4.9 | 1 |
| lineage3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4 | 1 |
| lineage2.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR18213713 | HR-TB | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR4800341 | Other | lineage3 | None | ERR9117709 | Other | None | SRR1184294 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR4816999 | Other | None | SRR6789626 | Other | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063883 | HR-TB | lineage4.9 | None |
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