lineage | Count |
---|---|
79 | |
lineage4.5 | 2 |
lineage2 | 3 |
lineage4.9;La3 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.1.1 | 1 |
lineage4.3 | 1 |
lineage2.2.1 | 3 |
lineage2.2 | 1 |
lineage4.8;La3 | 1 |
lineage4.1.2.1 | 2 |
lineage4.9 | 3 |
lineage4 | 8 |
lineage3 | 1 |
La3 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.1.1 | 1 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 111 |
ID | Drug resistance | Lineage | Country iso2 | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176751 | HR-TB | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR176643 | HR-TB | None | SRR671872 | Sensitive | lineage4.5 | cn | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675234 | Other | None | SRR3675311 | Other | None | SRR3675550 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR5341418 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341302 | HR-TB | None | ERR2693254 | Other | None | ERR2693231 | Other | None | ERR2693230 | Other | None | SRR5341333 | HR-TB | None | ERR2693232 | Other | lineage4.9 | None | ERR2693257 | Other | None | SRR6045892 | Sensitive | None | SRR6045555 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR502532 | HR-TB | None | ERR323043 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797069 | Other | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4407463 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR736874 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR736835 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6866410 | Sensitive | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR12416824 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None |
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