lineage | Count |
---|---|
97 | |
lineage2.2.1 | 3 |
lineage4.1.2.1 | 3 |
lineage4 | 1 |
lineage3.1 | 3 |
La2 | 1 |
lineage4.9 | 4 |
lineage2.2.2 | 1 |
lineage4.3.2 | 1 |
lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
lineage2.2 | 1 |
spoligotype | Count |
---|---|
None | 118 |
ID | Drug resistance | Lineage | Country iso2 | ERR2514692 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | SRR6325444 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045952 | HR-TB | None | ERR278594 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502524 | HR-TB | La2 | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | SRR7131274 | Sensitive | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323041 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797061 | Other | None | ERR3797083 | HR-TB | None | ERR3797069 | Other | None | ERR4811142 | MDR-TB | None | ERR4188350 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4407463 | HR-TB | None | ERR6358837 | HR-TB | None | ERR702404 | HR-TB | None | ERR6359045 | HR-TB | None | ERR736839 | Other | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR1173118 | Other | None | SRR1172310 | HR-TB | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1184294 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | ERR4815604 | HR-TB | None | SRR15368973 | Other | None | SRR1640750 | HR-TB | None | SRR19303884 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR181744 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675221 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | ERR212001 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675545 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212123 | Other | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4818929 | HR-TB | None | ERR234659 | HR-TB | None |
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