lineage | Count |
---|---|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
lineage4.9;lineage6.3 | 8 |
lineage2.1;lineage4.9;lineage6.3 | 4 |
lineage2.2.1 | 2 |
M.canetti;lineage2.2 | 2 |
lineage4.9 | 10 |
lineage2.1;lineage4.9 | 4 |
lineage4.2;lineage4.9 | 1 |
5 | |
La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
lineage4.8;lineage4.9 | 2 |
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage2.2.2;lineage6.2 | 2 |
lineage4.8 | 1 |
lineage3 | 1 |
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La3;lineage2 | 1 |
spoligotype | Count |
---|---|
None | 48 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR6045555 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675236 | Other | None | SRR1184294 | Other | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6044780 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR11049020 | Other | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR9117709 | Other | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR234659 | Other | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR4816999 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None |
---|