Rv1173 - c.1809C>T
Drug resistance types
3 Sensitive
0 RR-TB
10 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 1 |
| lineage4.9 | 13 |
| 8 | |
| lineage4.9;lineage6.3 | 2 |
| lineage4 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.7;lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 6 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.3.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.2;lineage4.9 | 2 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 56 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046521 | Other | lineage4.4.1.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4816999 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3283044 | Other | lineage4 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR7496509 | Other | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR3675457 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675236 | Other | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117709 | Other | None | SRR3675549 | Other | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR3675572 | Other | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR3675214 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR4815604 | Other | None | SRR6046066 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR3675311 | Other | lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR3797069 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR7496517 | Other | None |
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