Rv0635 - p.Ala115Ser
Drug resistance types
1 Sensitive
10 RR-TB
29 HR-TB
72 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| 14 | |
| M.canetti;lineage2.1;lineage4.9 | 22 |
| lineage2.1;lineage4.9 | 12 |
| lineage2.2.1 | 5 |
| lineage4.9 | 20 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 12 |
| lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage3 | 2 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 4 |
| M.canetti;lineage2.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1 | 1 |
| La3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage4.9;lineage6.3 | 3 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage3.1 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage1.1.1 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage3.1 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 173 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7496509 | Other | None | ERR9786604 | Other | None | ERR9786843 | Other | None | ERR9117709 | Other | None | SRR6789626 | Other | None | SRR1172857 | Other | None | SRR1196768 | MDR-TB | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR5162090 | RR-TB | lineage4.9 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR4821053 | RR-TB | lineage3 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675506 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3283016 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR1166821 | RR-TB | lineage4.1.2.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1165699 | Other | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR1173767 | MDR-TB | lineage4.4.1.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR323055 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675450 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675515 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | ERR234659 | HR-TB | None | SRR7535086 | Other | None | ERR2514692 | Other | None | SRR18213713 | HR-TB | None | SRR25827682 | Other | None | SRR3675236 | Other | None | ERR323040 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4800341 | HR-TB | lineage3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323034 | MDR-TB | La3;M.canetti;lineage2.1;lineage3.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR1023354 | Sensitive | lineage1.1.1 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1173778 | Other | lineage4.9 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173400 | Other | lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR323058 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR7496472 | Other | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR7240492 | MDR-TB | La1.7.1 | None | SRR6046594 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | SRR3675464 | MDR-TB | lineage2.1;lineage4.9;lineage6.3;lineage8 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR323038 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None |
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