Rv0005 - c.564A>G

Drug resistance types
11 Sensitive 1 RR-TB 62 HR-TB 4 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 33 Other
lineage Counts
lineage Count
70
lineage4.5 1
lineage2.2.1 3
lineage4.9 6
lineage4.1.1 1
lineage2.2 2
lineage4 19
lineage4.8;La3 1
lineage3 1
lineage4;lineage1.1 1
lineage4.7 1
lineage4.1.2.1 1
La2 1
lineage4.3.3 2
lineage3.1 2
lineage2 1
spoligotype Counts
spoligotype Count
None 113
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR19303884 HR-TB None
SRR18213713 HR-TB lineage4.5 None
SRR19304036 HR-TB None
SRR19303931 Other lineage2.2.1 None
SRR8692782 Other lineage4.9 None
ERR4815604 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR181744 HR-TB None
SRR3675221 HR-TB None
SRR3675311 Other None
ERR176643 HR-TB None
SRR3675236 HR-TB None
ERR4816585 Other lineage2.2 None
ERR176751 HR-TB None
ERR212121 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
SRR3742665 HR-TB None
ERR212001 HR-TB None
ERR212034 HR-TB None
SRR3675572 Other None
ERR4817893 Other lineage4.8;La3 None
ERR2513574 Sensitive lineage3 None
ERR234659 HR-TB None
SRR5341387 Other lineage4 None
ERR4819051 Other lineage4 None
SRR5341455 Sensitive lineage4 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819781 Other lineage2.2.1 None
SRR5341308 Sensitive lineage4 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341302 HR-TB None
ERR4819932 Other lineage4.7 None
SRR5341461 Sensitive lineage4 None
SRR5341333 HR-TB None
SRR5341467 Other lineage4 None
ERR4820854 Other lineage4.1.2.1 None
SRR6046305 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6044790 HR-TB None
SRR6046066 HR-TB None
SRR6045327 HR-TB None
SRR6046225 HR-TB None
ERR4831546 HR-TB lineage2.2 None
SRR6046492 Other None
SRR6046540 HR-TB None
SRR6789626 Other None
ERR323039 HR-TB None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
ERR323053 HR-TB None
ERR323043 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1035122 Sensitive None
ERR1063858 HR-TB None
ERR9117709 HR-TB None
ERR3797069 Other None
ERR4796929 Sensitive lineage4 None
ERR736834 Sensitive lineage4 None
ERR736872 Sensitive lineage4 None
ERR1063859 HR-TB None
ERR108471 HR-TB lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR5336148 Other None
ERR3797047 HR-TB lineage4 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4811493 HR-TB None
ERR702406 HR-TB None
ERR736839 Other None
ERR736848 HR-TB None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
SRR1172728 MDR-TB None
ERR987722 HR-TB None
SRR1172234 Other None
SRR1158918 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1169194 Other None
SRR1184294 HR-TB None
SRR1172817 HR-TB None
SRR1173153 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173400 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173629 Other None
SRR1174897 HR-TB None
SRR1172951 Other None
SRR1173384 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1173788 Other None
SRR1175049 RR-TB None
SRR1184380 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1184388 Other None
SRR1196546 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR12416824 HR-TB None
SRR1196768 MDR-TB None